LOCUS       XM_002729582            1401 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 240 (Tmem240),
            transcript variant X1, mRNA.
ACCESSION   XM_002729582
VERSION     XM_002729582.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_002729582.7.
            
            On Jan 21, 2021 this sequence version replaced XM_002729582.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1401
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1401
                     /gene="Tmem240"
                     /note="transmembrane protein 240; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     1 long SRA read, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     85 samples with support for all annotated introns"
                     /db_xref="GeneID:100362471"
                     /db_xref="RGD:2318117"
     CDS             232..1224
                     /gene="Tmem240"
                     /codon_start=1
                     /product="transmembrane protein 240 isoform X1"
                     /protein_id="XP_002729628.4"
                     /db_xref="GeneID:100362471"
                     /db_xref="RGD:2318117"
                     /translation="MGQNVELRPEGRGLSLRHRDRSGEPRPWMLARGGEVPPRRRRQE
                     EEGGDSEEEKEGGRSLEEGRGRREGAAARTAGSRAQGAPEGGAEGCQQRATGERPHNS
                     PHISAACARACPRGPRRPGARALTSAEAARAQHRAGAGRGTGAGGRRSGPARPRPMSM
                     SANTMIFMILGASIVMAIACLMDMNALLDRFHNYILPHLRGEDRVCHCNCGRHHIHYV
                     IPYDGDQSVVDASENYFVTDNVTKQEIDLMLGLLLGFCISWFLVWMDGVLHCAVRAWR
                     AGRRYDGSWTWLPKLCSLRELGRRPHRPFEEPTGNMVHVKQKLYHNGHPSPRHL"
ORIGIN      
        1 cctctggtca tgtagtcata gtccctggtc tgacttttca ggcccctcct ctgatggcac
       61 tttcttgctg gaagcggctg ggtgctgaca cttcctgtcc ctctttggaa ccaggagacc
      121 caagaggagg ggcctgcctt ggagaagtag agccgaaacg accacccggt ccaggccaag
      181 gcccagtcta gcacggcact gggcaaggag accagagcca agactgataa gatggggcag
      241 aatgtggagc taaggccgga ggggaggggt ctcagcctgc gtcacaggga taggagtgga
      301 gaacctcgcc cctggatgct ggcgcggggc ggcgaagtcc ctccccggag gcggaggcag
      361 gaggaggagg gaggagatag tgaagaagaa aaggagggag ggagaagcct ggaggaggga
      421 agagggagga gggagggggc cgccgcgcgg accgcaggga gccgggcgca gggagcaccg
      481 gagggcggag cggagggctg ccagcaacgg gcgacgggcg agcgacccca caacagcccc
      541 cacatctctg ctgcctgtgc ccgcgcctgt ccccggggtc cgcggcggcc cggcgcgcga
      601 gcgctgacct ctgcggaggc ggcgcgggct cagcatcggg ccggggccgg gaggggcacc
      661 ggggccgggg ggcggcgctc cggcccggcc cggccccgcc cgatgtccat gagtgcgaac
      721 accatgatct tcatgattct gggggcgtcg atcgtgatgg ccatcgcgtg cttgatggac
      781 atgaacgcgc tgctggaccg attccataac tacatcctcc cgcacctgcg gggcgaggac
      841 cgcgtctgcc actgcaactg tggccggcac cacattcact acgtgatccc atacgacggg
      901 gaccagtcgg tggtggacgc ctctgagaac tactttgtga cagacaatgt gaccaagcag
      961 gagatcgacc ttatgctggg cctgctgctg ggcttctgca tcagctggtt cctggtgtgg
     1021 atggatggtg tcctgcactg tgctgtgcgc gcctggaggg ctggtcggcg ctatgatggc
     1081 tcgtggacct ggctgcccaa gctgtgcagc ctgcgggagc tgggccggcg gccacacagg
     1141 cccttcgagg agcctacagg gaacatggtg cacgtgaagc agaagctcta ccacaacggc
     1201 caccccagcc cccggcacct gtgagtgccc aggactcggg gctgctgtgc acatgtaaag
     1261 ggacctcgtg gacgcccagc tggcaagatg ggactgcggc ctcaggccca gggtatgctg
     1321 ggctgtggcc agctgggctg tggccagcag gcaaatccag tggaaggtgc tgtctcttct
     1381 ttttataaag ggggttgggt g
//
