LOCUS       NM_001419544            1081 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus transmembrane 239 (Tmem239), mRNA.
ACCESSION   NM_001419544
VERSION     NM_001419544.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.292188.1,
                                           SRR26360181.1543885.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-57                JAXUCZ010000003.1  138057877-138057933
            58-1081             JAXUCZ010000003.1  138058067-138059090
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q36"
     gene            1..1081
                     /gene="Tmem239"
                     /note="transmembrane 239"
                     /db_xref="GeneID:100365450"
                     /db_xref="RGD:1592450"
     exon            1..57
                     /gene="Tmem239"
                     /inference="alignment:Splign:2.1.0"
     exon            58..1081
                     /gene="Tmem239"
                     /inference="alignment:Splign:2.1.0"
     CDS             72..527
                     /gene="Tmem239"
                     /note="uncharacterized protein C20orf141 homolog;
                     rCG26795-like"
                     /codon_start=1
                     /product="transmembrane protein 239"
                     /protein_id="NP_001406473.1"
                     /db_xref="GeneID:100365450"
                     /db_xref="RGD:1592450"
                     /translation="MQQPRVETDIIGAGEGPQRAAPWSAWVLRQDWVRWWVCHIPRSW
                     AQWWNTSGWRQPLQRMLWGLEGTLYLLLALMLCHALFTTGSHLLSSLWPVVAVMWSHL
                     LPAVLLLVLSALPALLFAASFLLLFSTLLSLVGLLTSMTHPGYAQDLDQ"
ORIGIN      
        1 gccaggttag cctgcacaca acaggaagca ccatgactta ggtggctctg cccaaaggtg
       61 caccagccgt gatgcagcag ccacgagtgg agacggacat catcggggct ggcgaggggc
      121 cccagcgggc agcgccctgg tcagcctggg ttctccgtca ggactgggtg cgctggtggg
      181 tatgccacat acctcggagc tgggcccagt ggtggaatac atcaggctgg aggcaaccac
      241 tgcagcgcat gctatggggt ctggagggga cactgtacct gctgctggca ctgatgctgt
      301 gccatgcact cttcaccact ggctcccacc tgctgagctc cctgtggcct gtggtggctg
      361 tcatgtggag ccacctgctg ccagctgtcc tgctgcttgt gctcagtgcc ctgcctgctc
      421 tgctcttcgc tgcctccttc ctgctgctct tctccacact gctgagcctc gtgggcctcc
      481 tcacctccat gactcaccca ggctacgctc aggacttgga ccaatagaag ggcaacccca
      541 tcttactgct tgtgtctgtt gagccctggc ctagggcctg agccctgtgg ggagggtggg
      601 cagggaaact ccaacagacc tcagaccccc agtcacaaac acaagtgggg gtctggattc
      661 tgggcatcta ccttaaaccc acactggtgt caggaacagg acggtcttgc taggacaaac
      721 cacggaaagc accatgtcac ttgatcttcc tggcagaacc cttttgtcac cacctcagcc
      781 ctcccagctc caggcttctt gagagtttcc atgtacatat ccctgggctt gtctggattt
      841 gtcccgggtc ctctctctaa ttccaggagg agcacacact ctggaatggg ttttattgac
      901 agaaagagag gctggggacc tcacctcaca gaaacgggaa agaggccaat catgggggag
      961 actgagggag ggtggagagt gtgtgtgtag actggaccca aggctttgtg cataagcaaa
     1021 cactccaccc tacatactca tatttttaag agcctccagg tctgttacaa aaatgcaaag
     1081 t
//
