LOCUS       XM_039083615            1416 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 237 (Tmem237),
            transcript variant X6, mRNA.
ACCESSION   XM_039083615
VERSION     XM_039083615.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039083615.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1416
                     /gene="Tmem237"
                     /gene_synonym="Als2cr4"
                     /note="transmembrane protein 237; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 33 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:316412"
                     /db_xref="RGD:1306705"
     CDS             224..1246
                     /gene="Tmem237"
                     /gene_synonym="Als2cr4"
                     /codon_start=1
                     /product="transmembrane protein 237 isoform X5"
                     /protein_id="XP_038939543.1"
                     /db_xref="GeneID:316412"
                     /db_xref="RGD:1306705"
                     /translation="MTSRETVGEPPPLLGTSTYAERPPRALPPVPSAIQDEIPLSHPK
                     KKKSRTKSTPAPASSEGLAEPVVNRRAEGSEPPAAELKEYPEAPVQRKQKKIRPPPEL
                     ETSFTEKPSSPSLLRNENGMDVEPREEVVIPKPRRKAKKMQPAEPQYASELGVEDEDV
                     ITDEQSTLEHHSRFTAPTGVSQPVGKIFVEKSRRFQAADRSELIKTTENVDVSMDMKP
                     SWTTRDVALSVHRAFRMIGLFSHGFLAGCAVWNIVVICVLAGDQFSNVSNLLQQYKPL
                     AYPFQSLLYLLLALSTVSAFDRISLSSLGFLDSLCTLGWPQTDRPTRLCFPRTWIKGS
                     TLLKPQ"
ORIGIN      
        1 cagctgtgcc cgaggggtgc ggcggggcca gataggggcg gtacggctgg gcggcccccc
       61 aaaagtcgat caatcccaac caacatccca gtgcccgtca gcgttgccat gacgacacct
      121 ctgggcggct ctcggctgca ggcaaagcgg gagaggaggc tgtttccggt gggagcttga
      181 atcctggtct ggtcaagcgg tgctcatccc cacgcaaatc gtgatgacct cccgggaaac
      241 tgtgggtgaa ccccctccgc tcctggggac gtcgacatac gctgagcgtc ctccgcgagc
      301 acttccacct gtgccaagtg ctatccaaga tgagattcca cttagtcatc ctaagaaaaa
      361 gaaatccaga acaaagagca caccagctcc tgcttcttca gaaggccttg ctgagcccgt
      421 tgttaacagg agggctgagg gcagtgagcc accagctgca gaactcaagg agtacccaga
      481 ggctcctgtt caaaggaaac agaagaagat aagaccacct cctgagttgg agacttcctt
      541 cactgaaaag ccatccagtc cgtctttact acggaatgaa aacggcatgg acgtggagcc
      601 tcgtgaggaa gtggttattc caaaacctcg aaggaaggcg aagaaaatgc agccagcgga
      661 accacagtat gccagcgagc taggggtaga agatgaagac gtaattacgg atgagcagag
      721 cactctagaa caccactcta ggttcaccgc acccaccgga gtcagccagc ctgttggcaa
      781 aatatttgtg gaaaaaagcc ggagatttca ggcggcggac cgttcggagt tgataaagac
      841 cacagaaaac gtagatgtgt caatggacat gaagccatct tggactaccc gcgatgtggc
      901 actttccgtg caccgagctt tcaggatgat cggcctcttc tctcacggct tcttggctgg
      961 ctgtgctgtg tggaatattg ttgtgatctg tgttctcgcg ggagaccagt tctctaatgt
     1021 ctccaacctt ctgcagcagt acaagccctt ggcatatccc ttccagagcc ttctttactt
     1081 gcttttggct ctaagtacag tttcagcatt tgacaggatt tctctgagta gcctgggctt
     1141 cctggactcc ctctgtacac taggctggcc ccaaactgac agacccaccc gcctctgctt
     1201 tccgaggact tggattaaag gatcgacttt gctaaaacct cagtagcaat ccggaacttt
     1261 ttggccctgg agccaacagc tttagcctct ttctgccagc agaagtggag gaaccggttc
     1321 tcatgccatg ggtcatagtg aatctggtgg tggcgcttct ggttggatta gcctggctct
     1381 ttttgtctta caggccaggc atggatctta gtgaag
//
