LOCUS       XM_006244977            5089 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 237 (Tmem237),
            transcript variant X3, mRNA.
ACCESSION   XM_006244977
VERSION     XM_006244977.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006244977.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006244977.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5089
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5089
                     /gene="Tmem237"
                     /gene_synonym="Als2cr4"
                     /note="transmembrane protein 237; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 31 ESTs, 7 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 213 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:316412"
                     /db_xref="RGD:1306705"
     CDS             145..1356
                     /gene="Tmem237"
                     /gene_synonym="Als2cr4"
                     /codon_start=1
                     /product="transmembrane protein 237 isoform X3"
                     /protein_id="XP_006245039.1"
                     /db_xref="GeneID:316412"
                     /db_xref="RGD:1306705"
                     /translation="MGKKQVVSEPQRPPRALPPVPSAIQDEIPLSHPKKKKSRTKSTP
                     APASSEGLAEPVVNRRAEGSEPPAAELKEYPEAPVQRKQKKIRPPPELETSFTEKPSS
                     PSLLRNENGMDVEPREEVVIPKPRRKAKKMQPAEPQYASELGVEDEDVITDEQSTLEH
                     HSRFTAPTGVSQPVGKIFVEKSRRFQAADRSELIKTTENVDVSMDMKPSWTTRDVALS
                     VHRAFRMIGLFSHGFLAGCAVWNIVVICVLAGDQFSNVSNLLQQYKPLAYPFQSLLYL
                     LLALSTVSAFDRIDFAKTSVAIRNFLALEPTALASFLYFTALTLSLSQQMTSDRIYLY
                     EPSVNGSLWPAEVEEPVLMPWVIVNLVVALLVGLAWLFLSYRPGMDLSEELMFFSDVD
                     EYPERGVKASP"
ORIGIN      
        1 tggcgggagg ggtggggacg cttcgggtcc cggagccagg gaggcgcagc ccgatgacgc
       61 tctgcgcctg cgcctgggcg gacaggccgg ggcggggcgg gcggccgctg ttctctgtgc
      121 tctacagccg tccctggaga cgtgatgggg aagaagcaag tggttagcga gcctcagcgt
      181 cctccgcgag cacttccacc tgtgccaagt gctatccaag atgagattcc acttagtcat
      241 cctaagaaaa agaaatccag aacaaagagc acaccagctc ctgcttcttc agaaggcctt
      301 gctgagcccg ttgttaacag gagggctgag ggcagtgagc caccagctgc agaactcaag
      361 gagtacccag aggctcctgt tcaaaggaaa cagaagaaga taagaccacc tcctgagttg
      421 gagacttcct tcactgaaaa gccatccagt ccgtctttac tacggaatga aaacggcatg
      481 gacgtggagc ctcgtgagga agtggttatt ccaaaacctc gaaggaaggc gaagaaaatg
      541 cagccagcgg aaccacagta tgccagcgag ctaggggtag aagatgaaga cgtaattacg
      601 gatgagcaga gcactctaga acaccactct aggttcaccg cacccaccgg agtcagccag
      661 cctgttggca aaatatttgt ggaaaaaagc cggagatttc aggcggcgga ccgttcggag
      721 ttgataaaga ccacagaaaa cgtagatgtg tcaatggaca tgaagccatc ttggactacc
      781 cgcgatgtgg cactttccgt gcaccgagct ttcaggatga tcggcctctt ctctcacggc
      841 ttcttggctg gctgtgctgt gtggaatatt gttgtgatct gtgttctcgc gggagaccag
      901 ttctctaatg tctccaacct tctgcagcag tacaagccct tggcatatcc cttccagagc
      961 cttctttact tgcttttggc tctaagtaca gtttcagcat ttgacaggat cgactttgct
     1021 aaaacctcag tagcaatccg gaactttttg gccctggagc caacagcttt agcctctttc
     1081 ttgtatttta ctgctctaac actatctctg agtcagcaaa tgacaagtga cagaatctac
     1141 ctttacgaac cttctgtcaa tggaagcctc tggccagcag aagtggagga accggttctc
     1201 atgccatggg tcatagtgaa tctggtggtg gcgcttctgg ttggattagc ctggctcttt
     1261 ttgtcttaca ggccaggcat ggatcttagt gaagagttga tgttcttttc tgatgtggac
     1321 gagtaccccg agagaggagt caaagcgtct ccgtagcgcc ggccggctcc gtccctgcag
     1381 tgacggcctg cgttccccac tcccgttttt aagtgtattt ttataagata catgtattta
     1441 taatcgagct tttgttacat aatgctgaaa tgctactgta gattgtaaat tatatctggt
     1501 ctttatacca aatattaggg tctttattat tttcacctta gtgacacagg agataatgag
     1561 ctaaaacaaa caaacaaaca aacaaaaaaa cacagcaggt gatgtgtttg tttcctgtcc
     1621 tttcaaattt gcaaaattca tgattattat tagctaaaga gcaccaattt agaaaagcct
     1681 taacctcagt gttataaaat atacatcaag tttaaatgta aatttagtga atggggaaga
     1741 tggaaaaatg tcttcatttt atatttttga tgtcttctta tggaacactg caggatgtga
     1801 tttgttttct ctgaatctgg ctagtgttat agctcatata ataattattt gccatttgaa
     1861 ttgaaagatg ctttatagct aataaaacag aaatacctat ctttgagagg ctttaaaaac
     1921 tgaagatttt tcctttttaa aatctgcacc agttattctc ctgtctgctt gcccctcaga
     1981 atcatgtagg gagctttggg agaatggctc acacctcctg taatctaggg cgtgggaggc
     2041 agaagcaggg gatcacgagg tcattgccac cctcagctac tcagcgagtt tgagtccagc
     2101 ctgagagaca tgagagccca tttctgaaac caaaagcagc aacaacgaag tcagacagca
     2161 aggagaagct ggaccaatag ccagctcagg cgtgtgatct ggggctgacc tctgagtctc
     2221 tgctctgact tcgtacagtt gatggatttc aaacctgggg ttttattctg gaaggcaggg
     2281 actctaccac tgagccccct ccccagtcct tctgtttctg ctagttttct gagaaagggt
     2341 cttgcgctgt ctctcggact gaccttaaac tcttgatcct ccttccccag cctcttgaat
     2401 gctgcgatca aggggttctt cttgtgagtc acgggaaaca tgaatggaag gtcaccgtcc
     2461 tcattttcac tctctatcgg atatctcagg tttttggaaa attccactct tggggtgggt
     2521 tctgcgtaga aaaaaaacgc tgtcctaaca catttcaaat ggttcttcag ctggtgtctg
     2581 tgagcttaag tccgacagct taagtcagtg agaagacctg ctagaagaga aggtgactca
     2641 aaggctgttg gacacatccc cgaaactact gggcctccca gattagcaca caactgaatg
     2701 ttgtatagaa gatgatggac ggattgttaa gtgaggtggc tgttcttgtc tctgcagcac
     2761 catagtgaaa ctgtccttta ctatctgtaa ggcccgagtt gctgaacggg tatttacccg
     2821 tgttatagaa ttataaatac atgcagttct gacattcctg ccagttttag tcttcactga
     2881 ttagcggtga ttctcatgtc ggcagcagct ggaagtgtag gagttcatag tctgttttgc
     2941 agcttctgca gggatgtgct gaagttgacc atatctgaat tgtgtcatca aggagaaatg
     3001 gggaaaggtg ctctcagtgt ggggttgttt ctgactgagt catggcccct ctaattcctg
     3061 gagtccacga taatatgact tttcacatca aaagtggttt tgcagatgtg agtagggata
     3121 agagccctga aatggggaga gtatcctcca ttgtgaggtg gctgatgttt tctaaaggat
     3181 taaagaaacc cttttatatt tcatcaaaga gctgttggtc agttgtgata tttctgctta
     3241 taaaggagga gggtccttta gtgacccgaa aggctggaaa cagactctta ctcagtagcc
     3301 aacagaaagg ctggaaacag actcttaccc agtagccaac agagatggaa ttcatgaatt
     3361 ctatcaagga caagcaagga atcagtcctc caggaagtgg taccgtccct gtgatacttt
     3421 ggtttggatt cagttatatc tgtaccagac ttgaaataca gacaggtaca gcttcgtatt
     3481 agccaagtgg ctaggtttgc tccaaatggc atggagaatg cagccttgca ctgcggctgg
     3541 aggaagctga ctgttaataa cgtcttaact gacagtggga gagtgatctt tgaattctgt
     3601 caggtctgag agaatgacgg aatctacaag tccttcacca ccacaactca acagtgcacg
     3661 tcaaagattc ttttgaccgt gattaggaaa gttctttaca agagccccat tggttaattc
     3721 atggccgatt gctacgatga gaatatcaga cctgtcaaat tggaattttt gaggatgaag
     3781 cctaggtttg tgggagcagc aggaagagag gatgaggctc ttaatctact tagatctggg
     3841 aatggaagga cctagaaaag gtttgtaggt gaagttagat gtaagcagag gctttataaa
     3901 atggatcatt tccttgtaga gatgagtacc aaaaaaccag aaaggtgaat gagcttataa
     3961 cttgaaaaaa cctttcatta tagtcatcat catcagtgtg tataaatgat agggaagggt
     4021 tttgtgccac agactcaata tggaggtcaa aggacaactc tgtgcagttg gttctctcct
     4081 tcgtcattta tatgggttcc gggtatcaaa cttgggtcgt caggctcgtg caaggatgtt
     4141 tgtctgctga gccagctcac cagttcagct cgacatttaa aaaaataaaa aagttttatt
     4201 tttatttaca tgaatgtgtg tccacgccac atgcatgtgg gtgcctctgc aggctagaag
     4261 tgttagattc ccagaactac aagaagttgt cagctgtcca gggtgggtac tgagtactga
     4321 acttgtcctc tgagacagct gcagatgttc ttgaccacgc ccagcatcat cactggagca
     4381 cgttttggag atcttttaaa aacacagagt tgtgagatat caggttaggc ttaatgttaa
     4441 acttttgaat gcccccaact ctttttcttt caaaatcttt tcaagggaaa tttattctaa
     4501 gactcggggg catatctcta ggaatgcaca gtaagtatca ttaaagcaac tagaaaaaat
     4561 aattccacga tatttaagat ccagttcatt tttagaattt ttctagttgt ccctcagatg
     4621 aaatttgaga gaccaaatct acttcatctt gggtctggcc tccatcttaa aaaaaaaaaa
     4681 tcaaaaacaa aacaaaaaca gtctgagaac ttgacctaca gctgaatcca aggtgcaccc
     4741 aagtactagg aagggccctg gggtttgtcc ttgcccgtag cccagagtta ctccctagat
     4801 actccctagc aacagttagt taagatcagt ctgattgttt cagatgtacc ttcagactgt
     4861 ttgtgatggt atatggtttt gcttcagagc ctgtcggctt acagtcattc tactacttgc
     4921 ttgccagact ggacaacccc tcacttgctc ctactttcct ataaaaactt atcctgttga
     4981 gggttcaggg ctgctctgcc ttcccttccc atcctgctgt gtcagggttg ggttgtagga
     5041 gagcccaagc ctgagcttgt aataaagaga ccctaatgct attacatca
//
