LOCUS       XM_001057551            3793 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 236 (Tmem236),
            transcript variant X2, mRNA.
ACCESSION   XM_001057551
VERSION     XM_001057551.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001057551.8.
            
            On Jan 21, 2021 this sequence version replaced XM_001057551.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3793
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3793
                     /gene="Tmem236"
                     /note="transmembrane protein 236; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 3 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:680523"
                     /db_xref="RGD:1590637"
     CDS             166..1206
                     /gene="Tmem236"
                     /codon_start=1
                     /product="transmembrane protein 236 isoform X2"
                     /protein_id="XP_001057551.1"
                     /db_xref="GeneID:680523"
                     /db_xref="RGD:1590637"
                     /translation="MASGKIIKLVVFELLEFAAFSVPTLVIMEQFATAYQGTKNGSER
                     THYWLIVSCSIAYVAGVSLLIWVPIKVVLYKKRHLYKKIIGWRPVLVMCVVLTTLPSF
                     SFSIAVTEVQKNINGSANLLSDSLPDLPVSLVLLSLIVVDIIEKLRIYPLRGSQMGYE
                     NNDICVTSLQQIKTVTEQVVRSDENPASAQAAKPNVMPQPRNQVTVLAGPMEPSFQSG
                     ILRTMSQRDVRAELFLRSFLMWSDTVEMVRVAGHPAVFKSGWLYPVYIFSFISLLRMV
                     FTPKNPLLSSLGILMQDLPFIFLRLSLIIALGTITPVLGLCKNVLVTMSYIYFNYVTK
                     LRPFSAFETSPF"
ORIGIN      
        1 tgactgttaa ctcagatcat tgaaccatat gagggtcaat aaaagaataa aatccctggt
       61 tagcgattcg agtacaagga acttgatccc agtgtgtgtt tatatgctgc tcactgtgac
      121 caggggagtg ccaggtcctc ggctgctacc tgcttgcttc tcaggatggc ttctggcaaa
      181 ataatcaagc tggtggtttt tgagctgctt gagtttgctg ccttctccgt tcctaccctt
      241 gtgataatgg aacagtttgc gactgcctat cagggaacaa agaacgggtc tgaaaggact
      301 cactattggc tcattgtttc ctgctccatc gcctatgtgg ctggagtgag tctcttgatc
      361 tgggttccaa taaaagtggt cctatacaag aaacggcatc tttacaagaa aatcatagga
      421 tggcgacctg ttctggtgat gtgtgtcgtg ctcacgaccc ttcccagctt cagcttctcc
      481 atcgcagtga ccgaggttca aaagaacatc aacggctcgg ctaatttgct gtctgattcc
      541 ttacctgatc tgccagtatc tctggttctg ttgtccctga tcgtggttga cattattgaa
      601 aaactcagga tatatcctct cagagggagt caaatgggtt atgaaaacaa tgacatctgt
      661 gtgacctcgt tgcaacagat aaaaacggtg acagaacagg tggttcggag tgacgaaaac
      721 cctgcttctg cccaggcagc caagcccaat gtgatgcccc agccccggaa ccaagtgact
      781 gtgctggccg gacccatgga gccctccttt cagtctggaa tcctgaggac gatgtctcaa
      841 agagatgttc gggcagagct cttcctgcga agctttctca tgtggtctga cactgttgaa
      901 atggtgcgtg tggctgggca cccagcggtg ttcaagtcag gctggttgta ccccgtctac
      961 atattcagtt tcatctctct cctgcgaatg gtcttcacgc ctaaaaaccc tctcctcagt
     1021 tccctgggga tcctgatgca agatctgccc tttatttttc tcagactcag tttaatcatt
     1081 gccctgggga caatcacgcc agtactgggc ctttgtaaaa atgtcctagt gactatgtca
     1141 tatatttact tcaattatgt caccaaactc aggcctttct ctgcctttga aacctctcca
     1201 ttttaaacag caaacgttaa ggttctaagt cctcctgatt atgctcgtgg acacatttgt
     1261 aaagtttgtc tgggtataaa cttttatggt ttaaccattt ccatcctata tgatagcttt
     1321 taaaaaaaga tatatatata catatatata catatataca catttatata tatatatata
     1381 tatatatata aatggtgcta cattttaaaa aaattacatt tcttcaggtt gcctcttcca
     1441 ggcttccaga aagcttagtt gttaaattta gacatgcaaa ttccacttta ggtgaaaaat
     1501 cagtccttaa tgaagccttt ttgaaatggc gggagccgtg agcggtagct taaggatgag
     1561 aattttatct ccagtccatt ccagaacatt ttgtggctta attattcaaa gtcagtttta
     1621 gaaaataact tggggttatt gaatatattt tagagtttgc ctgaaaatag gaattttagg
     1681 ggctcgttca aacttaaaat tacactgtgg ggtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     1741 tgtgtgtgtg tgtgtgaatg agtgttttca gcagtgagga ttgatcccag ggcacactat
     1801 cttagtagta gcacccacct accaataagc acatccctga ccttagaaat gcatttctta
     1861 ccccactgca ttgacctcta ttgagctcat tgactgagta gaaaactagg gtctttggca
     1921 gtcagcagct tggcaaaatt tccctaaagc ttcttgggct ggtgcggctg gcagtacttc
     1981 agtgttgagg atgatggagc caaggtacat tgtgattcct agataaagtt ttatagcaga
     2041 caccataaac tgaagacata catcgtaaga gtgtaacatg tgtggaattt gatgccatca
     2101 taaaaaaaaa aaaaaaaaaa ccatcaggta caagcctttc ttaaaatgat agtttggact
     2161 tggtgtgatg ccaaaggggc tttgcgttgc ccgaggtcct gaatatcttc acgctccaac
     2221 gatcacagac acggtcatga gctctgcagg cgctgtgttg gcatggaggc tcacatctac
     2281 agcagggatt ctctgtttat aaggggagtc tgtaagaagc ttatctctgc agagtaatgt
     2341 ggaaacaaac aatgagtaac tctgagtgtt cctgccctct gtcctgcaca cccaggttcc
     2401 tttcccaatt acgtctatag ttctcacacc ttagggaaga tctactggta attgttaaac
     2461 catgcttatt agtctggggc tagttccttg aatgctgtga ctcccactgc tgtgtaaaag
     2521 atgaaaacta tataaatact tctttagtcg tgtcaggaga ttgtaggatt cagagtgctc
     2581 tcaatacagc atcaaacaag taataaacgc tgggtattga acaataccat cccacatccc
     2641 tgcccacctt ctgagaataa tagtttacac ctggcatttg tgagatgtaa cctgtacgat
     2701 ctcaaggtta ccccagacta caagtttttg tcaatcactc ttgtggtcag tagtgaatga
     2761 gttgctaaat atttagataa aagcagatgt gggaagctgt tcttccactt gaatagaact
     2821 tctgtgagtt ttcaaagaac tcagactatg gcgctgtgtt tcttttattt tttatttttt
     2881 ttattttgga tgcagggtct caccatgtag ctcagtatgg gagtcaccat cctcctgctt
     2941 tcacttcccc catgctggga ttacaggggt gtgcactgct gaagattaac acaccctcac
     3001 cagcccacca atgtcacaca aacaccttcc acaaagccac acccctaaac cgctctttct
     3061 gtgtctgaaa gctttagatt ttatatctac ttttcttggt ttctcactaa cttgacaatc
     3121 ccctacgggg aagcccgaaa gtatcttgtt tagtggcgcc tctctacctg tcagtcctac
     3181 aggtaggtgc tcatgatgtt tgtaacataa aatacatatt ttctaaaatt gagaagtgtc
     3241 tacaaccaag tgactaatat acaatgttca taaatgcaaa actcgtttac atagatatat
     3301 ctttatatat tatatgtata tatctttatc ttgcaatctg agcaaatagc acccagtaaa
     3361 ctttaaagta ttacctgagt ttagtctgca ttttgtgtct catagtcgat atgcctgagg
     3421 tctggggatg taagcaatac ttgaaacaga taatgaaggc gtatataaca aacagatcct
     3481 gtaaggcagg gaaagctttg agtctctagc ctgagtgcac agatgtttat aaagctcaag
     3541 cctatggtat ttaagagaca tagtaaggac gtatgctgat gtagcatcaa tagttttata
     3601 ttatgtaatt aaaacctaca ttactaaaat tatactgtaa ttcttataag ctatttattg
     3661 ttgttggtat taaggtttcg tgtcctaata aaaagcttaa tttctgcttt aaagtgtgaa
     3721 tgcaaacact ggacagatct gtgatagact gtgtgatatt taacgctaaa taaaatctga
     3781 agttgcataa tta
//
