LOCUS       NM_001270390            2322 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 232 (Tmem232), mRNA.
ACCESSION   NM_001270390 XM_003750750 XM_003754553
VERSION     NM_001270390.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001270390.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161875.1, SRR26643293.52554.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-50                JAXUCZ010000009.1  112562578-112562627 c
            51-162              JAXUCZ010000009.1  112524457-112524568 c
            163-268             JAXUCZ010000009.1  112523734-112523839 c
            269-426             JAXUCZ010000009.1  112522282-112522439 c
            427-526             JAXUCZ010000009.1  112512023-112512122 c
            527-681             JAXUCZ010000009.1  112510212-112510366 c
            682-836             JAXUCZ010000009.1  112503568-112503722 c
            837-951             JAXUCZ010000009.1  112493325-112493439 c
            952-1204            JAXUCZ010000009.1  112486820-112487072 c
            1205-1383           JAXUCZ010000009.1  112457903-112458081 c
            1384-1616           JAXUCZ010000009.1  112438206-112438438 c
            1617-1710           JAXUCZ010000009.1  112344412-112344505 c
            1711-2322           JAXUCZ010000009.1  112334569-112335180 c
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q37"
     gene            1..2322
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /note="transmembrane protein 232"
                     /db_xref="GeneID:501199"
                     /db_xref="RGD:1559548"
     exon            1..50
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     CDS             34..1887
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /codon_start=1
                     /product="transmembrane protein 232"
                     /protein_id="NP_001257319.1"
                     /db_xref="GeneID:501199"
                     /db_xref="RGD:1559548"
                     /translation="MASKKWPSFSVTKEFILRFNNTDNRVKEEELLEQARKFTVRCKR
                     KLGLKTLGSGKHVHLPTAWAEVIYLAQCKGEIQDEALNMLYASLDHVSFDCDQLPTLF
                     FLAESVLYRLCCDAFKKEYLYSVEIKLVKIGYLIFLRLFVFFLHGHLENFKQHLLRLQ
                     PYLYALYYSEPSYYKYPNILSSLQFILKTAEIICKRELHFEVFESLREVEDPFSDTNH
                     VQLNKRGYEVNHLLWHSVAAWSCVQDNRPQLNAVLDHILFHKAQLQTKCWLDSALALL
                     VLGEAAKLNMACLKTLMDLMTHFLLSPQSQEDYCSIYDIPWASDIVFIYTSIIAEVCL
                     YAATSDLRKTALIGFCVCKDPQQDIHLTNKSEEMPELDGASILTLLKYFSSRISDNCA
                     KVIWVGYYGIVYNLVKMSWELQGDEEQDGFRNMVWQTLQKIKDYEEDPRIQNAVTIAQ
                     AELNDAADPFSSKAAPNSEAFSKYIGWRIANTLSRLFFPSLDVSALPQKTPVETDLQR
                     KHTISKRQPEKKGVVRIVMKEHPSVLELSMFPYPDFFTKADKKLEEVIDHHWQKDMET
                     LKQIEAVCEAQNRKDEEEKEKIRFQEIMKQRERKLNKQTKPYEITPSEKKE"
     exon            51..162
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            163..268
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            269..426
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            427..526
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            527..681
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            682..836
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            837..951
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            952..1204
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            1205..1383
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            1384..1616
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            1617..1710
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
     exon            1711..2322
                     /gene="Tmem232"
                     /gene_synonym="RGD1559548"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcagcagag actaaggcca gcaaagccca gtgatggcca gcaaaaaatg gccatcattt
       61 tcagttacca aagaattcat attgagattc aacaacacag ataaccgagt caaggaggaa
      121 gaactgttgg agcaggcccg gaaattcact gtcaggtgta agaggaagtt gggcctcaag
      181 accctgggct ctgggaagca tgtgcatctt ccgactgcat gggctgaggt catctatctg
      241 gctcagtgca aaggggagat ccaagatgag gctttaaata tgctctatgc ctctttggac
      301 catgtttcct tcgattgcga ccagcttccc accctgtttt ttcttgcgga atcagtttta
      361 tatcgactct gctgcgatgc attcaagaag gaatatttat attcagttga gataaaactg
      421 gtgaagattg gctatctgat cttcttacga ctttttgtat ttttcctgca cggtcactta
      481 gaaaatttta aacaacactt gctcaggctg cagccatatt tatacgcgct ttattactcg
      541 gaaccatcct actacaagta tccaaacatc ctctccagtc tgcagttcat cctgaagacg
      601 gcggaaatta tatgcaagag agagcttcat tttgaagtgt ttgagagctt acgtgaagtg
      661 gaggacccat tttctgatac gaatcatgtg cagctgaaca agagaggcta tgaagtcaac
      721 cacctgctct ggcacagtgt ggctgcgtgg tcctgcgttc aggacaatcg tcctcagctg
      781 aatgcggtgc tagaccacat cctcttccac aaagcgcagc ttcagaccaa atgctggttg
      841 gattcagcgc tggctttgtt ggtcctgggg gaagccgcta agttgaacat ggcctgcttg
      901 aaaacactga tggacctaat gacacatttc ctcttgtctc ctcagagcca ggaagactac
      961 tgcagtatat atgacatccc ctgggcctca gacatcgtct tcatatacac atcaattatt
     1021 gcggaagtct gtctgtacgc agccacctct gacctgagga aaacagcttt gattgggttc
     1081 tgtgtgtgca aagacccgca gcaggacatt cacctcacca acaagtctga ggagatgccc
     1141 gaattagatg gagcaagcat tttaactctg ctgaagtatt tctcttccag gatctctgat
     1201 aactgtgcga aggtgatctg ggtcggatac tatggcatag tgtataacct ggtgaagatg
     1261 tcatgggaac ttcagggtga cgaggaacag gatggattta gaaacatggt atggcaaaca
     1321 ctgcaaaaga taaaggatta tgaggaagac ccacgaatcc aaaacgcagt aacgatagcc
     1381 caggctgaat tgaatgacgc agctgaccct ttcagctcaa aggccgcacc aaactcagaa
     1441 gctttctcca agtacatcgg gtggagaatc gctaacactc tctccagact ctttttcccc
     1501 tctctggatg tctccgctct ccctcaaaag acgcccgtgg aaacagacct gcaaaggaaa
     1561 cacaccatca gcaaaaggca gcccgaaaaa aagggagtag tgcgcattgt tatgaaggaa
     1621 catccttctg tgttagaatt gtccatgttt ccgtatccag atttcttcac caaggcggat
     1681 aagaaattgg aagaagtcat tgaccatcat tggcaaaaag atatggagac cctaaagcaa
     1741 atagaagccg tgtgtgaggc ccaaaatcgg aaggacgaag aggaaaagga gaagattcgc
     1801 tttcaagaaa ttatgaagca gagagaaagg aaactgaaca aacaaaccaa accctatgaa
     1861 ataactccgt cagaaaaaaa agagtgaccc agaaaaaaaa tgtgggttct gccagccgga
     1921 atccagcgct gcaacaaacg ccaagtgagc tcggcgtaga ggagctttct tagcgtcagc
     1981 ctgctgcagc cattttaaaa aagaagttgc tatcttggta cccgttagta gtcacagcat
     2041 agtcttaaat taacagccaa ctcttcatca cacgtaggtg aagtggtttc gccagctaca
     2101 cccattcttc cctcagcggt cctccccttg ctctaggatc gctcttccaa ccactctaag
     2161 ctttgacatt ctctgcactg tgagaagaaa gtgaaacgaa gcctgattaa cgagtcagga
     2221 catgaggtgg gggtgtgtgc gagaattttt ctttagagcg agagtgaaca cgggattgag
     2281 cccctagaat cattcctatt tgaataaaga aattaggatg gc
//
