LOCUS       NM_001251926            3064 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus transmembrane protein 200C (Tmem200c), mRNA.
ACCESSION   NM_001251926 XM_001054710 XM_576628
VERSION     NM_001251926.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On or before Oct 25, 2011 this sequence version replaced
            XM_001054710.2, XM_576628.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.50508.1,
                                           SRR26643297.32656.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-277               JAXUCZ010000009.1  116252780-116253056
            278-3064            JAXUCZ010000009.1  116255832-116258618
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q38"
     gene            1..3064
                     /gene="Tmem200c"
                     /gene_synonym="RGD1561734"
                     /note="transmembrane protein 200C"
                     /db_xref="GeneID:501201"
                     /db_xref="RGD:1561734"
     exon            1..277
                     /gene="Tmem200c"
                     /gene_synonym="RGD1561734"
                     /inference="alignment:Splign:2.1.0"
     exon            278..3064
                     /gene="Tmem200c"
                     /gene_synonym="RGD1561734"
                     /inference="alignment:Splign:2.1.0"
     CDS             374..2281
                     /gene="Tmem200c"
                     /gene_synonym="RGD1561734"
                     /note="transmembrane protein TTMA"
                     /codon_start=1
                     /product="transmembrane protein 200C"
                     /protein_id="NP_001238855.1"
                     /db_xref="GeneID:501201"
                     /db_xref="RGD:1561734"
                     /translation="MIATGGLLRISARKQDPLRPPSQVPKRKRKAKKRRKNDVVVVKG
                     KLKLCSISGLIALCGILVLLVGIAMAVVGYWPKANAANRGGSKQFLPVGSIHRTGAAS
                     NSSSGNKNPAKNHSGTPGGVNSSSVGGPRSSPPARTAATSSSSSSSSSSSSTSVGFFF
                     RIFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTKIINLRDLYSTVIDVH
                     SLRAKDLAAAAAAAAAAAASSSAAAPGSAPPGAAPLNGFLNYVQSRGLELKPGSCAGS
                     ADAFGAAAMLARGSWPHPAGLGGGGSGTREAGSPPDLASSPRCPREPPSLTEAVYSIY
                     RERSSGAGRRRTTVAAVAAATATVTAAASGGSSPAPCSPTGSWGRQSTASSLVGSSLS
                     AFALLPLHGDRDRDRDSEGASCSWHRPPGERGSRDLPRGELDLSLTDLRGAEGGARWA
                     SGEPEEPEGGTTACTARGQGRRLPRTGRYAAWRRRSTSGLPEYRAPPSPEPPPSGFAA
                     DLDSGPPGTVATPSLPLRPEDSPGVRRDSHSSQSDDQSSSNKGYTPLREADTSVESVV
                     DVVARKRLDCEAATDPSTEHSSPEGPSPEPTRVELHTGQRQFTNKEKLFLISRSHTPG
                     VEDPELENSSN"
ORIGIN      
        1 accgtggcag acgaggaggt gcgcccgagg gaagaagggc tccaggcagc gcgcgggtag
       61 cagaggacct gacacttctt gggaactctt ggaaatggct cccgccacca agcccgaggg
      121 gactgcgagc ccctggcgca ggtttgtccc cgccggactg tccagccgtt ctcgcgcccg
      181 gggctccggg gcgctgtccc tgcgctccgc cgtcggctcg ggctgaaaag tttctccatg
      241 gttctttgtg tctcccgagc tgccccggtc tccctgggag gaggtgacca agcagctagt
      301 gggcagctgg cgctcccccc acacaagctt cagctgcagc ctgcgggctg gccttccatt
      361 ccaccagttc accatgatcg ccactggtgg cctactgagg atatccgcga gaaagcagga
      421 tcctctccgg ccccctagcc aagtccctaa gcgcaagagg aaagccaaga agaggcgtaa
      481 aaacgacgtg gtagtggtga aaggcaagct gaagctgtgc tccatttcgg ggctcattgc
      541 cctttgcggg atcctagtgt tgttggtggg catagccatg gctgtggtgg gctactggcc
      601 aaaagccaac gcagccaaca gaggtgggag caagcagttc ctgcctgtgg gcagtatcca
      661 tcgcactggg gcggccagca acagcagcag tggcaacaaa aacccagcca agaaccactc
      721 tgggacccca gggggtgtca actccagttc tgtgggcggg cccaggagtt cgcctcctgc
      781 aagaactgct gccacctcct cctcttcttc ttcttcctct tcctcctcct ccacgtctgt
      841 gggcttcttc ttccgaatct tctcaggcta cttgcactca gacaagctaa aggtctttgg
      901 acccctcatc atgggtatag gcatcttcct cttcatttgc gccaacgcgg tgctccatga
      961 gaacagggac aagaagacca agatcatcaa cctgcgggac ctctattcca ctgtcatcga
     1021 cgtgcacagc ctccgcgcca aagatctggc agcagctgct gctgcggccg ccgcggcggc
     1081 agcttcctcc tctgctgctg ccccgggttc cgctcccccc ggggcagcgc cgctcaatgg
     1141 ctttcttaac tacgtgcaat cccgaggcct ggagctgaag ccaggcagct gcgccggctc
     1201 tgcggacgcc ttcggggctg ctgcaatgct ggccaggggc tcatggcccc accccgctgg
     1261 actgggcgga ggtggcagtg ggactcggga ggcagggtcg ccgccggact tggcttcatc
     1321 tccgcgctgt ccgcgggagc ccccgagtct gaccgaggcc gtgtatagca tataccgcga
     1381 gcgctccagt ggggctggcc gtcgccggac cacagttgcg gcggtggctg cggctactgc
     1441 cactgtcacc gcggctgcca gcggcggcag cagcccggcg ccctgcagcc caaccggtag
     1501 ttgggggcgc cagagcaccg ccagctccct cgtgggctcc tcgctgagcg ccttcgccct
     1561 gttgcccttg catggggacc gggacagaga cagggactcg gaaggcgcaa gctgcagctg
     1621 gcacaggcct cccggggaac gcggctcccg ggatctcccc aggggagaac tggacctaag
     1681 cctgacggac ctccggggag ccgagggcgg cgcgcgctgg gcgtccgggg agccggagga
     1741 gccagagggc gggacgacag catgcaccgc cagggggcag ggccgccgct tgcccaggac
     1801 cggcaggtac gcggcctggc ggcgccgcag caccagtgga ctcccggagt accgagcgcc
     1861 accgtcgccc gagcccccac cttccgggtt cgcagcggac ctagactctg gcccccctgg
     1921 tacagtcgcc acgccctcgc tccctctgcg ccctgaggac tcgcccggcg tccggcggga
     1981 ttcccatagt tctcagtcgg atgaccagtc cagcagcaat aagggctaca cccccctgag
     2041 ggaggctgac acctctgtgg agtcagtggt ggatgtagtg gccaggaaaa ggctagactg
     2101 tgaggcggcc acagatccca gtactgagca cagctcccct gagggtccca gtccagagcc
     2161 aactagggta gagcttcata ctgggcagag gcagtttaca aacaaggaga aactcttcct
     2221 gatttccagg tctcacaccc caggagtaga agaccctgaa ttggaaaact cttccaacta
     2281 gggagagcgg ggcagggaaa gcagacacgc gtggggggta gagtaccact ggaacctctg
     2341 cattaaaagt ccccacccta ccccgactcc cctgtggaca agtccgagga aaccattcaa
     2401 tatccaaaga gctacagaat gttatccttg aattacgttc acaagattcc tgtagataac
     2461 tcaagcaatt tttttaaaaa aaaacaaaca agcaaagtcg tctttttatg tccgatggtg
     2521 attgtacgtt cgatgaaaac caaatgtatt aaaagatcac aacatagttc attagaggaa
     2581 actctcttaa ttttcttagg atcaaaataa tatatttttg acagtaactc tgtactttat
     2641 tcctattttt ctttgccccg cccccgccca acttcccgct cctgtactct gctgctgact
     2701 tcgtccatag ctgcttgtaa atggatgaca agctgacttc cgccctcttg cagagcttag
     2761 aattgaactt tctaggtgga gtcaaagccc aaagcatgag tattcgggga aagagggctt
     2821 ccttgcctca ccccactgtg ctctacaggt gtccagagga ttctattttt taaaaggata
     2881 tttgaatttt gctaccaggg tatgtgaaaa gtggagggcg ccagcgacca cactggattg
     2941 ttatgttctt aagctcacaa taccaagtac accatgcgtt cctgagtatt atcacacttg
     3001 tatggaaaaa taacattaat atttaaagtc ctttttttaa taaaaagttt ccaaacggtt
     3061 aaac
//
