LOCUS       NM_001399317            2299 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 200B (Tmem200b), mRNA.
ACCESSION   NM_001399317 XM_017593844
VERSION     NM_001399317.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jan 6, 2022 this sequence version replaced XM_017593844.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582419.1782513.1,
                                           SRR26643299.24580.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-82                JAXUCZ010000005.1  149391865-149391946
            83-2299             JAXUCZ010000005.1  149392405-149394621
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2299
                     /gene="Tmem200b"
                     /note="transmembrane protein 200B"
                     /db_xref="GeneID:688757"
                     /db_xref="RGD:1585251"
     exon            1..82
                     /gene="Tmem200b"
                     /inference="alignment:Splign:2.1.0"
     exon            83..2299
                     /gene="Tmem200b"
                     /inference="alignment:Splign:2.1.0"
     CDS             103..957
                     /gene="Tmem200b"
                     /codon_start=1
                     /product="transmembrane protein 200B"
                     /protein_id="NP_001386246.1"
                     /db_xref="GeneID:688757"
                     /db_xref="RGD:1585251"
                     /translation="MTAGSPGDRGARRSPEGRVSRLGRRLGRRRRPRSPPEPLRVRAR
                     LRLRSPSGAFAALGALVVLVGMGIAVAGYWPGRASHAHVPRTGRAHGPHERLRLLGPV
                     IMGVGLFVFICANTLLYENRDLETRRLRRGVLRAQALRPPDGPGWDALLPSPAHGSPG
                     AVAEPETWDLAPRRGPSPVPSVRSLRSEPANPRSGLPALLHSYPLKGPGLPPPWGPRT
                     QTGHVIITVQPSGSCIEHSKSLDLGLGELLLGAPAARDCAHRSWPRLDRLSLGGYAKL
                     GGDLGARV"
ORIGIN      
        1 agtgctggct gaagaagtct gcaaggaggg ggcgagcaag gagaagccgg agtcagagac
       61 acctccgccg gccctcgctg cgagcgcccg aacgaccgcg cgatgacggc cgggagcccc
      121 ggagaccgcg gcgcgcgcag gagccccgag ggccgcgtct cacgcctggg ccgccgcctg
      181 ggccggcgcc ggcggccgcg ctccccgcca gagccgctgc gggtgcgggc ccggctgcgg
      241 ctgcgctcgc cgtcgggggc gttcgcggcg ttgggcgcgc ttgtggtgct ggtgggcatg
      301 ggcatcgccg tggcgggcta ctggccgggc cgcgcctccc acgcccacgt cccgaggacc
      361 ggccgcgcgc acgggccgca cgagcgcctg cggctgctgg ggccggtaat catgggcgtc
      421 ggcctgttcg tgttcatctg tgccaacacg ttgctctacg agaaccgcga cctggagacc
      481 cggcgtctcc gccggggcgt gctgagggcg caggcgctgc ggccgcccga cggccccggc
      541 tgggacgcac tgctgcccag tcccgcgcac gggtctccgg gcgccgtcgc ggaacccgag
      601 acttgggacc tggccccgag gaggggcccg tcgccggtcc cgtcggtgcg cagcctgcgg
      661 tccgaacctg ccaaccctcg ctcggggctg cccgcgctgc tccacagcta cccgttgaag
      721 ggtcccgggc tgccaccacc ctggggtcct cggactcaga ctggacatgt gatcatcacg
      781 gtgcagccct ctggttcctg catcgagcac tccaagtctc tggacctggg cctgggggag
      841 cttctcctgg gggccccagc agctcgggac tgtgcccacc gaagctggcc acggctggac
      901 cgacttagtt tggggggcta tgccaaatta ggaggggact tgggggcccg tgtctgaggt
      961 gcaaggttta acctgctgtg aggctatcag tgtggaccat gggaccggga cactagaagt
     1021 ccagtgccca tagctgctcc agtcacttcc gaggctaggg tggatgttgt gggagcagcc
     1081 actaaagctc ctgacctgca tgtgtagagc agtgccagct gcacagaatg agctccaggg
     1141 gcatgtgtta atgtggacac cagcatgatt cagcctcagg aatttctcca gcccatgtgg
     1201 ccttagccca ggaccggtac cagaagggct gcagagtagg ccaagagcat cctgagacgc
     1261 acggggtacc ttggcaaaca acagtggtag gttgggatgt ccccaggctg ggacaggctc
     1321 cctctaagat ggcagtcgtg atggaaatgg gaccaccaga ggaaggtggg caatgagggg
     1381 gaatgagacc cactgcagct gactggggca gtgactgcac ctctaactgc caccatctca
     1441 agtccgttct tccttcagcc aaggggcctc tgtcctggca gggctaacta ctgccaaagt
     1501 cctgaccctg ggatcagact gcctccctgg agacaggtct cacttgtctg gctgtgctgc
     1561 aaagcctccc ccagctggca gagggcaccc tccagtcctc agcagttcct tcccactgca
     1621 ccttggccag tgggtggctt actactctgc agtggcttcc ctctcctccc caggtttaac
     1681 ttccccacgc tttagttaga agagacgctt tagttagaag agaactttaa aagtggatca
     1741 atcctcgcag tcgggtcttt tttttttttt tttaagttta ttgaaaaatg ccatacaaga
     1801 agcaagacca aacacttacc taaacactac agccacatct gtcactacaa aggcgcagac
     1861 agcaggccca gttactgcct atctcaccta agggaggggt ttttcggctg gactccgccg
     1921 gcatagttcc tattttgtca aatgtaaaca actacttgat atgattcata attttaaaaa
     1981 aatttacaaa gctccttcat ttttgtcatg aaaataatat atctgagaga tttgtaaaaa
     2041 caaccagcct agggctggta tttcccatga gcatcagggt gctggccagg ctgtagcccc
     2101 agctccattc ctcaaagtgg gccagggctc ccagaccccg aatacactgc tggccttggg
     2161 gagggccccc ggagtcagcc tccttgagcc ctcagtttag gaatataggg cttgctttgt
     2221 gggtgggtgg cagagatctc atgtggtttg aaggaaatct acttctgaag taaaaataaa
     2281 actgcagttg ggattgtta
//
