LOCUS       NM_001109281            2637 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus transmembrane protein 198b (Tmem198b), mRNA.
ACCESSION   NM_001109281 XM_001071441 XM_576141
VERSION     NM_001109281.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001109281.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643290.24544.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-407               JAXUCZ010000007.1  1818138-1818544     c
            408-652             JAXUCZ010000007.1  1817275-1817519     c
            653-1234            JAXUCZ010000007.1  1816088-1816669     c
            1235-1392           JAXUCZ010000007.1  1815581-1815738     c
            1393-2637           JAXUCZ010000007.1  1814210-1815454     c
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..2637
                     /gene="Tmem198b"
                     /gene_synonym="RGD1562342"
                     /note="transmembrane protein 198b"
                     /db_xref="GeneID:500762"
                     /db_xref="RGD:1562342"
     exon            1..407
                     /gene="Tmem198b"
                     /gene_synonym="RGD1562342"
                     /inference="alignment:Splign:2.1.0"
     exon            408..652
                     /gene="Tmem198b"
                     /gene_synonym="RGD1562342"
                     /inference="alignment:Splign:2.1.0"
     CDS             478..1515
                     /gene="Tmem198b"
                     /gene_synonym="RGD1562342"
                     /codon_start=1
                     /product="uncharacterized protein LOC500762"
                     /protein_id="NP_001102751.1"
                     /db_xref="GeneID:500762"
                     /db_xref="RGD:1562342"
                     /translation="MEKASLPLTLTSYPRPFNQQLPEPPDPRCILEPQDSLALAPALV
                     CALCCCFGIIYCCLGYRCFKAVMFLSGLLSGALVIFLLCHKERVLETQLSLEVSAGIA
                     LGIGLLCGLVTMLVRSVGLFLTGLLLGLTLGAGTLLGTEPIYRPHSAWVPVGGLIGLA
                     LLGALLTLRWPRPFTVLGTALLGAAVLVACADYFLEGLALGTRLGKRLQALPELPPLC
                     WYSWVLLGTWPILGALGTLAQWKLMAEERGSHTNVILSHQQRHLQLLRLHQQESKRHR
                     TPSGTGLCGGRCRNQLPPNIRSPAHRPAPSYQQSLRELELVPSPQATGPHTVLDLDSD
                     CSSTVLLTTPH"
     exon            653..1234
                     /gene="Tmem198b"
                     /gene_synonym="RGD1562342"
                     /inference="alignment:Splign:2.1.0"
     exon            1235..1392
                     /gene="Tmem198b"
                     /gene_synonym="RGD1562342"
                     /inference="alignment:Splign:2.1.0"
     exon            1393..2637
                     /gene="Tmem198b"
                     /gene_synonym="RGD1562342"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagcccccac ccacaagcta attgcattta gctcacaggg ttcgggctcc gacttgcctg
       61 aatttaggga gcaacgagca cagtgaccca ggagtgtgcc tgcggccaac tgggctggaa
      121 ggaagctgga ggtctaggga agcaattcca cccctttgct ctcctcagcc ctgctgggtg
      181 gtgagtagtt aacacccttc ctgacctctc cttgttttgc gtcccagact cttaagcgat
      241 tgagaagagc cccgggagtt ctccaatcct cagcctcaat agcagaagga aagtgcatcc
      301 tcaccacccc acttctgcaa taatatccca gtgccagcct ctcctctgtg atccttcagg
      361 atcagaatca aatcccattg gcagcccagg cgtgcatgga tgagagggtt caccaacccc
      421 tgccggatag ctatggatgg atgagaggag attactctaa ccttccactc tgtgaccatg
      481 gagaaagcct ccttgcctct gactttaaca tcttacccaa ggccctttaa tcaacaactc
      541 ccagagcctc cagacccaag atgcatcttg gaaccccagg acagcctcgc cctggcccct
      601 gctcttgtgt gtgccctttg ctgctgcttt ggaatcatct actgctgcct cggctaccgc
      661 tgcttcaagg cagtgatgtt tctctccggt ctgctgtcag gcgctctagt gatcttcctg
      721 ctgtgccata aggagcgggt gctggagaca cagttgagcc tggaggtgag cgcaggcatc
      781 gccctgggca ttggactcct ctgtggcctg gtcaccatgc tggtccgcag tgttgggctc
      841 tttctgaccg gtctcctgct aggtctgacc ctgggtgctg gaaccttact gggcactgaa
      901 cccatctacc ggccacattc agcctgggtg ccagtcggag gactgatagg gctggcactg
      961 ctgggagccc tgctcacact tcggtggcca cgtccgttca cagtcctagg cacagcactg
     1021 ctaggtgctg cggtactggt ggcctgtgct gactacttct tggaaggact ggccctaggc
     1081 actcggctgg gtaaacgcct gcaggcactt ccagagttgc ctcctctttg ctggtatagc
     1141 tgggtcttgc tgggaacctg gccaatcttg ggggctcttg ggacactggc ccagtggaaa
     1201 ctcatggctg aggaacgtgg aagccacacc aatgtgatct tgagccacca gcaaaggcac
     1261 ctccagctcc ttcggctcca tcagcaagag tcgaagaggc accggacccc ttctgggaca
     1321 ggactgtgtg gaggcagatg tcggaatcag cttcccccca acatccggag ccctgctcac
     1381 aggccagctc caagttatca gcagagtctc cgtgagcttg agctggtacc aagcccccag
     1441 gccacaggcc cccacaccgt cctggacctt gattctgact gcagctccac cgtcctcctt
     1501 accacacctc actgagccta tcctccagtg acactgacac cctgatgagg gtaggagatt
     1561 gccaagtgga tacacagggc ctgagccctt aggacccata cagatttccc tacctcttgg
     1621 acttagggat aggttctgtg cccagagcag cccttttgga gatagtcaga ggaaattctc
     1681 gtaaagatgg gggaagactg aaaggtacaa gcacctacct ccgtccagta acagaggtgc
     1741 catggtccct agagacactg actccaaacc taggaggtgt gcccagaaca gcttgttatc
     1801 actttctcta atgctgaggt gtaacccaga gcgatgccca gagtagacaa gtgttctacc
     1861 actgaactac aacccagtct caaagacttg ttttgttttc gtttgggttt tggggttttg
     1921 gtttggtttt tggttttggt tttttgtttg tttgtttatt tgtttgtttg tttgtttgtt
     1981 tttggtttgg ttggggtttt gctgtttcat ggcaggactt ctttgtgtaa cctggctgtc
     2041 ctacaactca ctctgtagac caggctggcc ttgaactcac agggatctgc ctatctgtgc
     2101 ctccccagtg ctggccacca catgcaccac cacacccagt gatagggttt ttggcaggaa
     2161 ggatggcaca gaaatgctcc aagatctccc agtccccagg ctccttactg ggggtaactg
     2221 ggcttctggt tggcctttct tcctggaccc tatactcttg aatcctgcta cctcggtggg
     2281 aagctccgtc ttcaatggtg ctcccccctc tcctcaatgg aggaagaccg cagcatctgc
     2341 ctcagctacc ctctctccaa aagctggctc cttgtccttt ttctcagagg agtctggtct
     2401 tacggctgca cggtagtcaa gtgccttctg tctctcaaag tagctttgct cctaaaccag
     2461 aattcgggtc cagccattga ccattctaac tctccctcct ctgactctcc tgactgaagt
     2521 ctatgtcctg gtttcccaga catattacag aaaacataac tttcccctga gcagcagatc
     2581 tgtaatgaca gggaggaaga acaagggaat tcgggaataa aatgtcattg aaaattc
//
