LOCUS       XM_002730042            2205 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 198 (Tmem198),
            transcript variant X1, mRNA.
ACCESSION   XM_002730042
VERSION     XM_002730042.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_002730042.7.
            
            On Jan 21, 2021 this sequence version replaced XM_002730042.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2205
                     /gene="Tmem198"
                     /note="transmembrane protein 198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 136
                     samples with support for all annotated introns"
                     /db_xref="GeneID:100361928"
                     /db_xref="RGD:2319152"
     CDS             402..1484
                     /gene="Tmem198"
                     /codon_start=1
                     /product="transmembrane protein 198 isoform X1"
                     /protein_id="XP_002730088.1"
                     /db_xref="GeneID:100361928"
                     /db_xref="RGD:2319152"
                     /translation="MPGTMETLRFQLLPPEPDDTFWGAPCQQPLERRYQALPALVCIM
                     CCLFGVVYCFFGYRCFKAVLFLTGLLFGSVVIFLLCYRERVLETQLSAGASAGIALGI
                     GLLCGLVAMLVRSVGLFLVGLLLGLLLAAAALLGSAPYYQPGSVWGPLGLLLGGGLLC
                     ALLTLRWPRPLTTLATAVTGAALIATAADYFAELLLLGRYVVERLRAAPVPPLCWRSW
                     ALLALWPLLSLMGVLVQWRVTTERDSHTEVVISRQRRRVQLMRIRQQEERKEKRRKKR
                     PPRAPPRGPRAPPRPGPPDPAYRRRPVPIKRFNGDVLSPSYIQSFRDRQTGSSLSSFM
                     ASPTDTDYEYGSRGPLTACSGPPVRV"
ORIGIN      
        1 gccaggatgg tgcaccctga gtgacgtcag gagcagaggc cggagctgtc catcagcacc
       61 aaaggccgcc ggcgggctca gggcatgggg ccgcgctccg ggacagcccg agctcctgct
      121 cctttctctt ccccgggccg ggcccgagtc accggactgt ggggctgcag tgccagcggg
      181 tgttggaggt ggggcgacga cgccgtcgca cagagacccg tctctccggc ccagcaaccc
      241 ccttcgcacg gaggactttg cccggacccc agttagtcgg agcctctggc gtccaacaac
      301 ctccgatcct ccggccctgc acaccctcct ttgctcggaa gctcgggtca cctccagccc
      361 aggttgtcct gggagggtga ccctccttca ttcccagcac tatgccgggt actatggaaa
      421 ctctgcggtt tcagctgctg cccccggagc cggatgatac cttctggggt gcaccttgtc
      481 aacagcctct ggagcgcagg tatcaggcac tgcctgccct cgtctgcatc atgtgctgct
      541 tgtttggagt cgtctactgc ttctttggtt accgctgctt caaggctgta ctcttcctca
      601 ctgggttgct gtttggctca gtggttatct tcctgttgtg ctaccgagag cgggttctgg
      661 agacgcagct gagtgctggg gcaagcgcgg gcatcgcact gggcattgga ctgctctgcg
      721 gactggtagc catgctggta cgcagcgtgg gcctcttcct ggtggggcta ctgctcggtc
      781 tgctgctcgc tgctgctgcc ctactaggct ccgcacccta ttaccagcct ggctccgtat
      841 ggggcccact ggggctgctg ctgggaggcg gcctgctctg tgccctgctc acgctgcgct
      901 ggccccggcc actcaccacc cttgccactg ccgtgacggg tgctgcactc attgccaccg
      961 ccgcagacta ttttgccgaa ctgctactgc tggggcgcta cgtggtggag cgattgcggg
     1021 ctgcccctgt gcctcccctc tgctggcgga gctgggccct gctggcactc tggcctctcc
     1081 ttagcctgat gggcgttctg gtgcagtgga gggtgacaac cgagagggac tcccacacgg
     1141 aagtggtcat cagccggcag cgaaggcgag tgcagctgat gaggatccgg cagcaggaag
     1201 aacgcaagga gaagcggcgg aagaagagac cccctcgggc tcctcccaga ggtcctcggg
     1261 cacctccaag gcctggtccc cctgaccctg cttatagacg caggccagtg cccattaaac
     1321 gcttcaatgg agatgttctc tccccgagtt acatccagag cttccgggac cggcaaactg
     1381 ggagctctct gagctccttc atggcctcac ctacagacac ggactatgag tatgggtccc
     1441 ggggaccact gacagcctgc tcgggacccc ctgtacgggt gtagtcatgt tcccgctgtc
     1501 tgggctctcc agtcaccagc tctgacatct tcgagacgcc tgccaggcca ctactgaggc
     1561 tgcaaggccc tgtggccttt ggctgtctcg cctccttgga gagggttggc cagccaccaa
     1621 aagggaggct gcgtctcagg ctaggtaggc ctggcctgag ggagaagttc ccgtccaagc
     1681 tcccgaggga ctcggggtgt gagccccatt gggatgtgct cagggttgtg tgttgcccat
     1741 acatgtgtgt gaaggggtag gcttggcggg gatactggga cccttgcctt agatttgact
     1801 ggcagggctt cttcagggcc agctccgcct cctgtccccg ctgctggggt cccatgggcc
     1861 actctcctgc atgtctgtgt ggaggaggcc cacccgcctc ccctactgct ctaccttcca
     1921 accattcatc taagggttct tgttattgtc cacgggactg atagcagcac tcctcaccct
     1981 ggtcccctga cctctgcaaa gccaccagcc tgagggcagt ggcagaggat gagggtgagg
     2041 ggtgctgttc tgggttgggt ttgggagggt ggaggggaaa gggcttaaat gcacggtgca
     2101 tgtctggtgt ctgctatgcc accttagaca cctcatgctt ctgtctcctc ccgccctgtt
     2161 ttacatcttt tataaatgtg ccaaactatg cggcctctgc cagaa
//
