LOCUS       XM_039100631             894 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 190 (Tmem190),
            transcript variant X2, mRNA.
ACCESSION   XM_039100631
VERSION     XM_039100631.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100631.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..894
                     /gene="Tmem190"
                     /note="transmembrane protein 190; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:691446"
                     /db_xref="RGD:1583927"
     CDS             79..615
                     /gene="Tmem190"
                     /codon_start=1
                     /product="transmembrane protein 190"
                     /protein_id="XP_038956559.1"
                     /db_xref="GeneID:691446"
                     /db_xref="RGD:1583927"
                     /translation="MVGSGISALGLLLLMQGSVDANGIQGFFYPWSCEGDVWDRESCG
                     GQAAIENPNLCLRLRCCYRDGVCYHQRPDENMRRKHMWALGWTCGSLLFLITSISLFW
                     WARRRDMLHVPRFLRGKCSRLAGSVSLLSKDRRTANKKPTPDATTTQVYSVPQSSGGA
                     EVEAAATVSGEETEGAEE"
ORIGIN      
        1 cggggcccag ctgttgctag ggttgatgtc cttcaaggtt tctttccata gaggccccag
       61 ggggtctggg gaggtaacat ggtggggtct gggatctcag ctttgggcct tctcctgctg
      121 atgcagggct cagtagatgc gaatggaatc cagggatttt tctacccatg gagttgtgag
      181 ggagatgtgt gggaccgaga gagctgtggg ggtcaggcag caatcgagaa tcccaacctc
      241 tgcctacgcc tgcgatgctg ctaccgggat ggtgtatgct atcatcaacg gccagatgaa
      301 aatatgcgga ggaagcatat gtgggcactg ggctggacct gtggcagcct actcttcctg
      361 atcaccagta tctctctctt ctggtgggcc aggcgccgag acatgctgca tgtaccacgc
      421 tttctacgag ggaaatgtag tagactggca gggtcagtct ccctactgtc taaggaccga
      481 cgaacggcca acaagaagcc aaccccagat gccaccacta cccaagtgta ctcagtgcca
      541 caatcctcag gaggcgctga agtagaagct gcagctacag tttccgggga ggaaacagag
      601 ggagctgaag aatagggaag caccatgagc aactaatctc cagtcctcaa acttcccttg
      661 cccctcagca cagtgcctga gtggctacag aagtgcacgg gcatcatcca gcaaggactt
      721 cagctcccag agtctccact ggccaagcct tttcttggaa gtgtgctgtc tgcactcagc
      781 ttcagtctgt ccaattagct ctctctctct ctcctcctag tcttgcaggt atcctgcatc
      841 aatgtcattt tctatatagg accaaccctg tagtaaatat cttgcaagtt cagt
//
