LOCUS       NM_001013871            1671 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus transmembrane protein 183A (Tmem183a), mRNA.
ACCESSION   NM_001013871 XM_213887
VERSION     NM_001013871.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   3  (bases 1 to 1671)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079375.1.
            
            On Apr 20, 2005 this sequence version replaced XM_213887.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079375.1, FQ210515.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q13"
     gene            1..1671
                     /gene="Tmem183a"
                     /gene_synonym="RGD1309892; Tmem183"
                     /note="transmembrane protein 183A"
                     /db_xref="GeneID:289034"
                     /db_xref="RGD:1309892"
     exon            1..145
                     /gene="Tmem183a"
                     /gene_synonym="RGD1309892; Tmem183"
                     /inference="alignment:Splign:2.1.0"
     CDS             37..1167
                     /gene="Tmem183a"
                     /gene_synonym="RGD1309892; Tmem183"
                     /note="clone MNCb-2755"
                     /codon_start=1
                     /product="transmembrane protein 183"
                     /protein_id="NP_001013893.1"
                     /db_xref="GeneID:289034"
                     /db_xref="RGD:1309892"
                     /translation="MARGPGQLSGPRPDTVTMPKRGKRLKFRAHDACSGRVTVADYAN
                     SDPAVVRSGRVKKAVANAVQQEVKSLCGLEASQVPAEEALSGVGEPSDILDSSDEMDA
                     QEESTQERSVSRKKKSKRHKEDLDGAGGEEYPMDIWLLLASYIRPEDIVNFSLICKNA
                     WTVTCTAAFWTRLYRRHYTLDASLPLRLRPESMEKLRCLRACVIRSLYHMYEPFAARI
                     SKNPAIPESTPSTLKNSKCLLFWCRKIVGNRQEPMWEFNFKFKKQSPRLKSKCMERLQ
                     PPIQYQDVHTNPDQDCCLLQVTTLNFIFIPIVMGMIFTLFTINVSTDMRHHRVRLVFQ
                     DSPVRGGQHLRSEQGVQVVLDPVHSVRLFDWWHPQYPFSLRA"
     exon            146..235
                     /gene="Tmem183a"
                     /gene_synonym="RGD1309892; Tmem183"
                     /inference="alignment:Splign:2.1.0"
     exon            236..403
                     /gene="Tmem183a"
                     /gene_synonym="RGD1309892; Tmem183"
                     /inference="alignment:Splign:2.1.0"
     exon            404..563
                     /gene="Tmem183a"
                     /gene_synonym="RGD1309892; Tmem183"
                     /inference="alignment:Splign:2.1.0"
     exon            564..744
                     /gene="Tmem183a"
                     /gene_synonym="RGD1309892; Tmem183"
                     /inference="alignment:Splign:2.1.0"
     exon            745..825
                     /gene="Tmem183a"
                     /gene_synonym="RGD1309892; Tmem183"
                     /inference="alignment:Splign:2.1.0"
     exon            826..981
                     /gene="Tmem183a"
                     /gene_synonym="RGD1309892; Tmem183"
                     /inference="alignment:Splign:2.1.0"
     exon            982..1647
                     /gene="Tmem183a"
                     /gene_synonym="RGD1309892; Tmem183"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccgcggctc cgggagccgg ctctcggggc cgagaaatgg cccggggccc cggccagcta
       61 agcgggcctc gtccggacac cgtcaccatg cccaagagag gaaagcggct caagttccgg
      121 gcccacgacg cctgctctgg ccgagtgact gtggcggact atgccaactc ggatccggcg
      181 gtggtgaggt ctggacgggt caagaaagcc gtggccaacg ctgttcagca ggaagtaaaa
      241 tctctctgtg gcttggaagc gtcccaggtt cctgcggaag aggctctctc tggggtgggt
      301 gagccgagtg acatcttgga cagcagtgat gagatggacg cccaggagga aagcactcag
      361 gaaagatctg tctccagaaa aaagaaaagc aagagacaca aagaagacct ggatggggct
      421 ggaggagaag agtatcctat ggatatttgg ctgttgctgg cttcctatat ccgtcctgag
      481 gacattgtga atttttccct gatttgtaag aatgcttgga ctgtcacttg cactgctgcc
      541 ttttggacca ggttgtaccg aaggcactac acgctggatg cttctctacc tttgcggctg
      601 cgaccagagt ccatggagaa gctgcgctgt ctccgggcat gtgtgatccg atctctgtac
      661 catatgtatg aaccgtttgc tgctcgaatc tccaagaatc ctgccattcc agaaagcact
      721 cccagcacac tgaagaattc caaatgctta cttttctggt gcagaaagat tgttgggaac
      781 agacaagaac caatgtggga gttcaacttc aagttcaaaa aacagtcccc tagattaaag
      841 agcaagtgta tggaacggtt gcaaccgccc attcagtatc aagatgttca caccaaccct
      901 gaccaggact gctgcctgct gcaggtcacc accctcaact tcatctttat tcctattgtc
      961 atgggaatga tatttacctt gtttactatt aatgtgagta cagacatgcg gcatcatcga
     1021 gtgagactgg tgttccaaga ttctcccgtc cgtggtggtc agcatctgcg cagtgaacag
     1081 ggtgtgcaag tcgtcctgga cccagtgcac agtgttcggc tctttgactg gtggcatccg
     1141 cagtatccgt tctccctgag agcatagttc ctgcttccca tccctgggga tggcttccag
     1201 tctagtccat tagtgatcag attctgtttg gagggggcag ctggatcgtg tagctgatta
     1261 gcgatgcaca ggctgtttgg gttcctgggg ctcctattac aggaggtgtg gagaggttga
     1321 atcaagagga aaaccaacta tgatttataa acattttaat gtaaaatttg catatttgaa
     1381 aggagaaacc cggcctcatt tcctgtgtta aacctcagtt ggtgctgttg agtttgtttt
     1441 tattctttta tctcggcaaa tggatgatct tgtgttaggg gaagttaaac ttactcctca
     1501 aggaagaaca tttgccctta gggatcagag gaacccagag gcttaaaaca gttgttccaa
     1561 tgttgctgct cctcaaattc aagtgaatat tttttctttt ccctttaccc ttctccagaa
     1621 ataaagcagg tgacagggtt atcagaaaaa aaaaaaaaaa aaaaaaaaaa a
//
