LOCUS       NM_001401303             876 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 179B (Tmem179b), transcript
            variant 1, mRNA.
ACCESSION   NM_001401303 XM_006231001
VERSION     NM_001401303.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 8, 2022 this sequence version replaced XM_006231001.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ225083.1, SRR26643295.5762.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760476,
                                           SAMN12840113 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-123               JAXUCZ010000001.1  215101109-215101231 c
            124-311             JAXUCZ010000001.1  215100254-215100441 c
            312-446             JAXUCZ010000001.1  215100041-215100175 c
            447-525             JAXUCZ010000001.1  215099791-215099869 c
            526-876             JAXUCZ010000001.1  215099245-215099595 c
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..876
                     /gene="Tmem179b"
                     /note="transmembrane protein 179B"
                     /db_xref="GeneID:690263"
                     /db_xref="RGD:1582850"
     exon            1..123
                     /gene="Tmem179b"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..687
                     /gene="Tmem179b"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1"
                     /codon_start=1
                     /product="transmembrane protein 179B isoform 1 precursor"
                     /protein_id="NP_001388232.1"
                     /db_xref="GeneID:690263"
                     /db_xref="RGD:1582850"
                     /translation="MALPWLQRLELVLFTAAFLCGALAAAALTRTQASFGGSCPLYGA
                     VALNGTYLALSHPSASSLCYFVAGASGILALYCLLLLFFWVYSSCIEDSQRGSIGLRI
                     ALVISAIAIFLILVSACILRFGTNSFCNSIISLNHTISCSEAQKISWKPPGTAVQFYS
                     NLHNAETSSWVNLILWCLALMLQVMQCKFQATPYQPQERGDPEWSSETDALVGHRQSH
                     S"
     exon            124..311
                     /gene="Tmem179b"
                     /inference="alignment:Splign:2.1.0"
     exon            312..446
                     /gene="Tmem179b"
                     /inference="alignment:Splign:2.1.0"
     exon            447..525
                     /gene="Tmem179b"
                     /inference="alignment:Splign:2.1.0"
     exon            526..876
                     /gene="Tmem179b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggttggcttc ctggtggcct gggcgccatg gcgctgccct ggttgcagcg acttgagctc
       61 gtgctcttca cggccgcctt cctgtgcggg gctctggcgg ccgcggcgct gacccggacc
      121 caggcctcct tcggtggtag ctgtcccttg tatggtgcgg ttgcactcaa tggcacctat
      181 ctggccttgt cacatccctc agcctcttcc ctctgctact ttgtggcagg agcttcaggc
      241 atcctggcgc tctactgcct tctcctcctc ttcttctggg tctacagcag ctgcatcgag
      301 gactcccaga gaggttctat agggctccga attgctttgg tcatctcagc tatagccatc
      361 ttcctgatct tagtgtctgc ctgtatactt cgatttggca ccaattcttt ctgcaattcc
      421 atcatctcct tgaatcatac aattagctgc tctgaagccc agaaaatctc atggaaacct
      481 ccaggaactg ctgtgcagtt ttactccaac ctacacaatg ctgaaacctc ttcttgggtg
      541 aatctgatat tgtggtgtct ggccttgatg ctccaggtca tgcagtgcaa gtttcaagcg
      601 acaccatacc agccccagga gaggggtgac ccagagtgga gctctgagac tgatgctctt
      661 gttgggcacc gccagtctca ctcctgaaga atatcgagtg ctttctgcaa ccagaacctc
      721 caagcccaat tgcttttaat cttcttgtct ctgtacagcc ctgtttatat tggaaacctc
      781 agttttccct ccaggaggga aacattcgaa taggccactt ctgctttttc tccttaactt
      841 ttttgtacca aaataatata ttacttttct tcatca
//
