LOCUS       NM_001195277           10118 bp    mRNA    linear   ROD 17-JUL-2023
DEFINITION  Rattus norvegicus transmembrane protein 178B (Tmem178b), mRNA.
ACCESSION   NM_001195277 XM_001053868 XM_002726348
VERSION     NM_001195277.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 10118)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JACYVU010000141.1.
            
            [WARNING] On Mar 29, 2024 this sequence was replaced by
            NM_001195277.3.
            
            On Feb 10, 2021 this sequence version replaced NM_001195277.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence. The genomic coordinates used for the transcript
            record were based on alignments, including zebrafish
            NP_001002396.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132278,
                              SAMD00132279 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-422               JACYVU010000141.1  58279646-58280067
            423-536             JACYVU010000141.1  58400068-58400181
            537-674             JACYVU010000141.1  58608546-58608683
            675-10118           JACYVU010000141.1  58646468-58655911
FEATURES             Location/Qualifiers
     source          1..10118
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q23"
     gene            1..10118
                     /gene="Tmem178b"
                     /note="transmembrane protein 178B"
                     /db_xref="GeneID:679651"
                     /db_xref="RGD:1585938"
     exon            1..422
                     /gene="Tmem178b"
                     /inference="alignment:Splign:2.1.0"
     CDS             41..925
                     /gene="Tmem178b"
                     /codon_start=1
                     /product="transmembrane protein 178B precursor"
                     /protein_id="NP_001182206.1"
                     /db_xref="GeneID:679651"
                     /db_xref="RGD:1585938"
                     /translation="MAAGRLLLYTGLSLALCALGMLAVAICSDHWYETDARKHRDRCK
                     AFNTRRVDPGFIYNNNNNLPLRASRSRLDRWEGKLLRARNRRQLFAMSPADECSRQYN
                     STNMGLWRKCHRQGFDPEIAALIRKGEIERCTYIKYHYSSATIPRNLTFNITKTIRQD
                     EWHALHLRRMTAGFMGMAVAIILFGWIIGVLGCCWDRGLMQYVAGLLFLMGGTFCIIS
                     LCTCVAGINFELSRYPRYLYGLPDDISHGYGWSMFCAWGGLGLTLISGFFCTLAPSVQ
                     PVPRTNCPKSRPENGTVC"
     exon            423..536
                     /gene="Tmem178b"
                     /inference="alignment:Splign:2.1.0"
     exon            537..674
                     /gene="Tmem178b"
                     /inference="alignment:Splign:2.1.0"
     exon            675..10118
                     /gene="Tmem178b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcggatc atgcccatgg tgtagccgcc aagcggaggc atggctgccg gaaggttact
       61 gctctatacc gggctttcgc tagcgctctg cgccctcggc atgctggctg tggccatctg
      121 ctccgaccac tggtacgaga cggacgccag gaagcacagg gacaggtgca aggccttcaa
      181 cacccgccgg gtcgaccccg gtttcattta caacaacaac aacaacttgc ctctgcgcgc
      241 gagccgttcg cgcctggacc gctgggaggg caaactcctc cgggcccgga atcgccggca
      301 gctgttcgcc atgagccccg cggatgagtg cagccggcaa tacaactcca ccaacatggg
      361 cctctggagg aagtgccacc ggcagggctt cgacccggag atcgccgccc tcatacggaa
      421 aggagagatt gagagatgca cgtacatcaa gtaccactac tcctcagcga ccatccccag
      481 gaacctcaca ttcaacatca cgaagaccat tcgccaggat gagtggcatg ccctgcatct
      541 gcgtagaatg acagctggct tcatgggcat ggcggtggcc atcatcctct ttggctggat
      601 catcggtgtc ctgggctgct gctgggaccg aggccttatg cagtatgtgg ctgggcttct
      661 cttcctcatg ggaggaacct tctgcatcat ttcactgtgc acctgtgtgg ctgggatcaa
      721 ctttgagcta tcacgttacc cacgctacct atacggactc ccggatgaca tcagccacgg
      781 ttatggatgg tctatgttct gtgcatgggg gggcctgggc ctcacactaa tctcgggatt
      841 cttctgtacc ttggccccct ctgtccaacc tgtcccgagg accaactgcc ctaaatccag
      901 accagagaat gggacagtgt gctaaaaaac aaagacaaaa aaacaaaccc atacctatat
      961 atatatataa atatatatat aatatacata tataaaatga aacgcaatca agatgatgcc
     1021 agtgccaagg tagagttgag ttggctcagg cacctgcatc tcaccagact ttgtgttgcc
     1081 tcatgtccaa gatggaaaaa gtgtccccat cctgtggctc tctcatccgt ttttgacttt
     1141 ggcttcatga tttcttcaag acagagtgaa ggccaccaca ggcatcttga tccttgtcac
     1201 tcgtacggat gtggtggtga gctggaaggg acaaaggcag tggtctaaag cgacacagat
     1261 acaaagaagg acgtgccaca ctctgggcca acaggagagg acaccaccac caccccagcc
     1321 atcatatcat gggggaaact cagtcccttg agttcataga atgtaaccac atctttgagg
     1381 ccattttcag atccacttct ctgctcttcc tgttctgagc tccttcccaa cccaccagcg
     1441 acacagcaca agtggaagag aaaacagact gagaaggaag ttttctcttt gcggccaaac
     1501 ctttggacga tgctttagag gtgggaaggg gagagaagat gctgagaggc aagatccaca
     1561 tcaactaaag gacatttcaa tggatgctca gaaaacccag tcttaccttc cagctgcctt
     1621 acacccagtt aaacaagagg ccaccctgtc ctcccctgcc tgcactctct gggcagattg
     1681 gagcctttga gtaatgctgt gatgtgtgcg tgtatgtatg tgtgtgggtg ggtgggtgtg
     1741 tgtgcacaca catgcatgtg tgcacatgca tataggtatt gggtggttac ctttttcttt
     1801 tccactctgt gaatggaact atcatattac tctgttgtct ctcttactac tgttgttttt
     1861 gacccattat agaggcccca agaaccggga attatcttga ggggcaggcc ttcaggggtg
     1921 ccaatgcagc agctgcagat ccctggagag agacaaaagt gtgtgtgtga gtgtgtgtgt
     1981 gcgtgtgtgt gcatgtccac gcacgtgtgc atgcacacgt ggtagatagt tcgtgagtgt
     2041 gggattttat tgtttgtgtt gcatattttt tctattattt ttggtacagc tgaaattccc
     2101 agagggcaaa ccaagaacaa aactactggg ccagagaacc ctgtggtacc tcacagtatg
     2161 gttctggaac tccgcaagat ttagtccact aagtttggaa gttcaagaca cagctgggca
     2221 caaaagtcct aagagaagag ggggaaacat acagttcagg agagaaaagg aatattgcct
     2281 ctggttgctg atgtgcgagt acatataaca aacaagacct tcactcccca ctgtgggggc
     2341 tgtcctttgt cactggatgt ctgctcctct tctaggggca agccctgtac agaggagagg
     2401 aaatgagtca catgcagaaa gagcacctcc aagtcccatg ggctcaagtt tgtatgatat
     2461 tatgtaaatg aatggagaac tcttgactct ttccgttctc gtccctctcc tcttgatctt
     2521 caaggccatg aatcccaaaa tagcgatcta tcttagaggc tagcacccaa actgaggtgc
     2581 catccaaacg ggcaaggccg tccaggtatc tcaggcttgc ctgagcaaat ttgcactggg
     2641 tgctggcgag tgaagaagtc agccagagct gtgaatgcca cagggcagaa acagctcatg
     2701 gttaccttgg ggaccctgct ggtgccaagt gtccctgggg aggcaaggag agaatcctga
     2761 gctggcacaa ccatggtcag ccatgcagaa ggggagctca gctgctgcag aacagatctg
     2821 ctttggaaac tttgccaacc actcggcagc cttccgcaac tctgtgctct gtcacagctc
     2881 tctgtttcca acctctttcc ctcccagact cctcacctac taacagcttc cctcccctct
     2941 ctccatctac caggctgtag gtcctgttct tctcatctgc tcttttgatc acccctcctc
     3001 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     3061 ttgtcatcgt gtatctatat acaggtacag gtgtggatgc atttctcaag accccctcag
     3121 aagggccctg gtgagattct gcagcagagt tagcatgtga gcacccagag cgtaggagaa
     3181 ccagatgatc aggggcaaac tggtatcagg aaatgctgct ggcttccaat tgagtttatt
     3241 tttaatttat ctatttacat caaatgctgc tccccctcct tgtccccctc atagagatct
     3301 tcccccattg agatttttaa gtccatttta aagacaaagg gtatattcta tgataaggga
     3361 aatcactttt aaaaaaaact caattttttt ttaattgaca ggtttttttc tttgaaaagc
     3421 tagatttttc tcttaaggtg aaagatatac cgaagtttga gggaataaat gaaagtctct
     3481 cagattgaga gatcttttgt tctccttcta gatatcttga gctgagcagg gataagcagg
     3541 aaggtatcca tgaacaccca cttggggtac ttttctgtga ctgaacgcta attccagctg
     3601 ccttccattt gcaaaaagac agaggaagct aagccaaatg ggacattttg ttagtcacta
     3661 tttaaactct tcttgaaaaa acttgcttga catacttgtt cacagacctc tcatttatgc
     3721 attattttta aaaaaattca cactcatctt aaacagatca tctgctctat ccaattgccc
     3781 aacaccatga tgaactttca gtaaaactca ctggcttcct ttgaaacaca agcattcttg
     3841 aaacattgga tggactccca ggaaggagac agactttctg ggctcaactc ctcaactgag
     3901 catgagcaga gcaggacctt agagtaactc tttccctatt acaactggac agggtcaggt
     3961 acagatgtgg attctgatcc tacttagcaa cagaacaagc tcaggtacct aatcaggaga
     4021 gaagtctcct cactgctcgc agatagcaat ctccgtccag ggggtctgac tcctctacca
     4081 caggggattg agcactggtt aaaactagcc cctctggtgt agtttctggg actttctggc
     4141 tgtgagatgg ctagggaatg cataaaggag aaggaggtgt cttgggttgt cacactctct
     4201 aggtcagact ccactaactc caaatcatag actccaacct tttgacagga gcctggttcc
     4261 taccccagtc aagttccaat agctgtgtgt atacaaggtg tgtggttgca caagctgtgg
     4321 gctctgtgca aacctacagc gtgaggccac tctcaacact catttctttt gctctctcct
     4381 agattggaga tttgggaaag ttgggaccta actggggcaa aatacaattt cctgttttca
     4441 ttggaggaat tatggctcct cttctaccta ccttctttct gcgactttcc ttatgatcca
     4501 ttcttcgtga cagataactt tgtagggact caagacactt caggcacctc tccttctttg
     4561 ccacggcctg aggtctcaca ggaggtatgt ggatcatgaa cataagaaaa aatatctgtt
     4621 ctagctttag tcaccggaca gcctttcagc agctcccctt tctcacctct agggatcata
     4681 aaagcatagt tacagcattt ccccagagcc agataagtct tctttggcct caggtccttc
     4741 agtggtagcc tgggcccaga cactgtgctg gtgtattctc cctcacaggg atttctaccc
     4801 aagcatgtca cctttcctca ataggaaagg gtaccccgag actttgcatc tccttagaca
     4861 tccatataca tgataagagg cctaattaga aaggaccagc tatgtaatat tcagaataat
     4921 aaggtccaac tcattgctca gagcatttga tgtcaactgt cttcggctgg gaacgtttat
     4981 tcactgattt ttcaatcatg taggggaaga aacagactca gacaccctct gtctttatgt
     5041 ggaatactgg ttgcttctca tcgttagaga gaatcttctg gaaaggtctc tgctgcttct
     5101 gacctgatat gccccagtga acacatccat ccctctccag ggaaacatga tgagtcagaa
     5161 gacctggttt catagagaat gacagtaagc cttactgcta tcttctagcc catacagacc
     5221 gaggaagggg gcagatttct ttttaaagca agaccaacag agaaggtgca tcccaatgat
     5281 tctggtgcct ctcagggtgc ttgacttctg ggcttatgtt tatcacctct ccctccatgc
     5341 tgctaagcca caaaacattt cgttgacatt ggtcctagtc cttagactag gttattacca
     5401 gctagtgagc tttcctccct gaggaataca tgctcattat agaaaaacta ggggaaaatc
     5461 atgcaaacga ctgaaagact tgtcccttac catggaccca ttcataaggg tcagacctca
     5521 gaaactcttc aatgagtgct tgtcactggg taaatagatg gggccagaat gacatacaaa
     5581 ccagaaaggc agcgaggaga catttgaaag ctcacaccag agctatatag atccctctcc
     5641 ttctctctcc cactctctct ctctctcccc tacttctttt tttttttcag gtgccatctc
     5701 aatctaatca tgggtataaa ttcactgagg ccagagaaac tcactaatta agctacactt
     5761 gtaaaatgta gcaatggctg aacatttcac ttcactctgt actaaaacga tttgtgactc
     5821 tgggcactgt gtcttctcca tacttgaact tcctcatcta caaaatgagg acagcgataa
     5881 cgctttacct catggtatat taagggtgac aaataaattg caaagcaatt tgcaaacacg
     5941 aagaagtgtc tatgaatcat gtgctgttca aattacccat tatcggcagt gcagccacga
     6001 caatggaatg gttccatcaa ggctctgcca agaggctaat gtagagtggg agaggccatc
     6061 ttggttgctg aacttgagtg tagctatcca acagaagcac atgggattca cttctttcag
     6121 ccctccagag aaatggcctc cttcatagtc tttccccatt gccagactca ctttctttat
     6181 tccaaggcca gtcttgcaaa gttcacgctc atttcctgcg tgttaccaga agtaacgata
     6241 tggagatatc atgtggagga caagagtgta gatgactcat atagttcact ttgaaagcag
     6301 gcatggagtt aaggctgttt gttttaacag ttctgttatc attcctcgct gtacacactc
     6361 atgttgggga gcaaagtcag agtcttgaag cttctagagc tctctcacat ttagagtgaa
     6421 gataagtatg gtaaaaggaa gggcccactt cctcttgtca gctataaaac tggtgacttc
     6481 atcaatagcc cctcagttct ggtaggaggt cgtgagtgtc gtatcaagtc gggacacgcc
     6541 cctgtatgat cttgcttgga tcctaaattt gaaaggagaa aatgattgat ttccccaaaa
     6601 gaatttccat gcctttcttc tttcctgtgt gcactgagat gttctacaga gcaagtcctt
     6661 gctctctcta tgactagagt gtagtcgata ataagggtaa tggcacaccc acaagggtgg
     6721 gtcgttcaca gccaacaaac agaaaactgg gccccaacct atgagttgcc cagttacaca
     6781 gctcaacctg gcatctccct gacaaatgcc aggatattat tcctacctaa ggcctgttat
     6841 gactccctag ggaaacaacc cagtgtcctc cattgctctc ccttggaccc caaacttttc
     6901 ctttcttctc tgggtggtcc gtaggcccat ttccatttgt atgtgccagt atgtctgtgt
     6961 cgtgagtgtg atggtgcctt tcacacagag atttcacaga accactctca tgccctaccc
     7021 ggcctgcccc cccatcccca cccccactgc ccatggtgtg actgttttgc tattcaagac
     7081 tctctgtaaa aaaatgtaca aataaaagta aaagctgaaa attaagggga ggggaattgc
     7141 atcttcttaa atgctgtaat gtagccctcg gttttctgag ggtctgtgag gactgcccta
     7201 gaatcctgac tctgggggca cttgaaggga gggaacgcct gtcacagatt tttctggttg
     7261 ttttcctgat ggtcgcttct gcttgcttgg tattctctgt tctgaagact tttgccttta
     7321 aagttaagta ggtctccccc cacccccaaa taaaagcata tcatccaagt tagaatagtg
     7381 aaggtcaagg ccggtgtcaa ctccaagaca tggcctgggg tgatattagt gattttgtta
     7441 atagctcacc tggaaccttg ggtgaatctt gtgacctcac tgtgtatcca tgtcctctca
     7501 gcctcacagg aagcagggtg acattgggga cacatgtaac acccagtctc cctgtccatt
     7561 ctgctgctat ttgtgcccat gctggctgcc gtatgctgac tgagctgagg cagttcagga
     7621 gaagctctct ccctgttgct ctggccctaa gctgactcgc ctcagaaagt aacctcaagc
     7681 cagcagccag tttgagtgca gagtccaaag cctttgatct accttttcag tctcagatgc
     7741 cttttcccac ccactttgat gatctcatct tgctctctgc tgacagagct ttgcctcaca
     7801 ggactggggt aggagaaaga ccatcaaagg tgatggtgtg agtgaatcgc tttaccaact
     7861 gtggctggct caacgaatgt ggcttactgc ataaagaagc tcaggctgcc caggggacgc
     7921 tataaaatgg ggaggggaaa aaagaaggtg gttctgggga tggggtggag gttgtgggta
     7981 gaagatgtgg ttagataaac ttagaggtta atgaagaaat gtttgtgctt ccaaaagccc
     8041 ctcagaaaca tccccaaggc agtaaccctg gcaggatcca ggacatggat aatcctggag
     8101 tacaagaggc tgctagggag gagtggttgc ccaagagaga tacacaaatt tggcctgtgc
     8161 tagcaccctt acactcatgg ttacaggccc ttcagtctaa cacttcctca ttcctaatgg
     8221 agcttggtga ccctccttga gaattgtata aggaaggact tagaccaccg ctgtccaata
     8281 aaatttgata caagttgtgt atgaaatttg aattattcta ctacctgggt ttaaaagcac
     8341 caacaaaaca ggtgatatta atttcaatgc tatatttgaa cccagtagat caaaagatat
     8401 tagcacttca atgtggaacc agtgtaaaag tcactggcat gttttatgtt ctgtctattt
     8461 caagtaaaat cttctaaacc caaggtgact tttaccctga gaaaacctct ccaactggat
     8521 cagccacacc ttgagtgctc aaaagctgca ccaggctttt gtgaccatct aggagaacag
     8581 acttaagtct tttcagagcc tgagcagggt gcccattgcc agtgagtcac acactgtggt
     8641 ggatttcctt gtgggaacaa agacaaaggc tggatttgct gaatagaagc tgagctatga
     8701 ccatgatgct ggctcacttt tagaagctct actttacctg tgtagtaagg ggagagagtc
     8761 actgctgtga accaaccaca tgttatgcct gcctcaagag ctatcagtgc tctccttgga
     8821 catggccctg atgatctaag tcctaggaag aaagcaggcc atggcctttg gctgcaggag
     8881 agtcagccgc ggcccaccct atccatgtag atgtcttata tctcatgata agggatagac
     8941 agacctccct gttgctaaga ataaacacct ctcccatctt ttaatatctg gtggagtctc
     9001 ctgctaaaag catctcactg atatttggag ctgtttgatt catcctctaa ttgctttaat
     9061 ttttttttta aatcttgagt attgaaaagg ggatatggga aaagaatagc aggcagaccg
     9121 ggtctcctat gaggtagcag agacaagtcc tatccttaga ctaggactaa gaccaccatt
     9181 tcctacctct cctttctgct tagagatctt ccttagatct aaataagcct cttctctgtg
     9241 tgtgagaaag acaggtagtg agatcttagg gcatagaaca gaataaatat aagcaaccgg
     9301 ccccaccaat catgtcaaag atccagtatg ataaggcttg attcacttaa aatataatat
     9361 tctgagccct atgctgtcaa acaggagaaa gggagctggt gagtacatcg agtatgtggt
     9421 cattagaaag ggaccagggc ctacaaaacg ctcaaacacc tggcgtgttg agggtctgcc
     9481 agattattgc tcagtcaata taaatttatt taccttcact ctaatttgca tagtgctttc
     9541 tgattgatta gatacagtgt ggtgtatacc gcaggattct aacaagactc tctcctcttg
     9601 gaggtagcaa ttcctgtggt tattggtgct aaaataagat taaatattat gttaatttgt
     9661 tctaatacaa tttgaataaa tgtattgttt aatcttaaca agaatgctac atcttatcag
     9721 atctattgta ctgtctgttt cttctcataa ttaattaatt acaggaaagg tgatccaaac
     9781 cagatctcga aactcttgtg atactctgag aggaacttac cagggaagtg ggagggggaa
     9841 tgaaaaggga aattgccagg ttcctgtgac tttgaaagga ccgaggaagc agagagcgag
     9901 catttgggga cttcactgaa actgactgca tcttgcaatt ttctttttcg aattggcaga
     9961 aatattgtta tttccatcga ttgaagaaaa aaagtgtctg gtaattaatt aaatgacttg
    10021 ttcatggaaa acaataaaaa taaataatct gtcagttgtg gaatgtaaac tgattaaaca
    10081 attaaataaa gaagaccatg ttgtgtgttt taaaagcc
//
