LOCUS       NM_001013903            1173 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus transmembrane protein 171 (Tmem171), transcript
            variant 1, mRNA.
ACCESSION   NM_001013903 XM_215130
VERSION     NM_001013903.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Feb 25, 2022 this sequence version replaced NM_001013903.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY185507.1, SRR26360172.756581.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-34                JAXUCZ010000002.1  31779233-31779266   c
            35-751              JAXUCZ010000002.1  31776496-31777212   c
            752-887             JAXUCZ010000002.1  31772388-31772523   c
            888-1173            JAXUCZ010000002.1  31769486-31769771   c
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q12"
     gene            1..1173
                     /gene="Tmem171"
                     /gene_synonym="Prp2"
                     /note="transmembrane protein 171"
                     /db_xref="GeneID:293634"
                     /db_xref="RGD:1359492"
     exon            1..34
                     /gene="Tmem171"
                     /gene_synonym="Prp2"
                     /inference="alignment:Splign:2.1.0"
     exon            35..751
                     /gene="Tmem171"
                     /gene_synonym="Prp2"
                     /inference="alignment:Splign:2.1.0"
     CDS             115..1086
                     /gene="Tmem171"
                     /gene_synonym="Prp2"
                     /note="isoform 1 is encoded by transcript variant 1;
                     parturition-related protein 2; proline-rich protein PRP2"
                     /codon_start=1
                     /product="transmembrane protein 171 isoform 1"
                     /protein_id="NP_001013925.2"
                     /db_xref="GeneID:293634"
                     /db_xref="RGD:1359492"
                     /translation="MSSVGTAEPDGDQRDRQVSKLIFFLFVFGAVLLCVGILISIFGY
                     QACQYKPLSHCSMVLKIAGPSCAVMGLGTVILARSRARLQLRERQRQGHQDPDQSFFC
                     GESRQFAQCLIFGFLFLTSGMLISILGIWVPGCGSDWAQEPLNETNSGEGEPQICSFL
                     SLQIMGPLIVLVGLCFFVVAHVKKKSNLSSSRDTSEIEGGHTHSTEPVHITVGDSVII
                     FPPPPPPYFAESSAAAPSPGANSLHRIENPPSYSSLFNLSRTPTPENQGAASERDREV
                     IYTISGPGSSSESSHTGHLPLDLPPRYEEKETAPATPLGAPSESSPP"
     exon            752..887
                     /gene="Tmem171"
                     /gene_synonym="Prp2"
                     /inference="alignment:Splign:2.1.0"
     exon            888..1173
                     /gene="Tmem171"
                     /gene_synonym="Prp2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggggtgtgg cggagagtcc caggaccaag gcagagtctg caactgtcag agggaaggac
       61 acacattcct ctttcacatc ggggagcagt gaggaggcct tttcttttct ggccatgtct
      121 tctgtaggaa ctgctgagcc agacggagac cagagggacc gacaagtcag caaactcatc
      181 ttcttcctct ttgtcttcgg tgcagtcctg ttgtgtgtgg ggatcctgat ctccatcttt
      241 gggtaccagg catgccaata taagcctctc tcacactgca gcatggtgct aaagattgct
      301 gggccttcct gtgcagtgat ggggctggga actgtgattc tagcccggtc ccgggcacgc
      361 ctgcaactga gggagcgaca gcggcagggc catcaggacc ctgaccaatc cttcttctgt
      421 ggagagagcc gccagtttgc ccagtgtctc atctttgggt tcttgtttct gaccagtggc
      481 atgctcatta gcatactggg tatctgggtg ccaggatgtg gctcagactg ggcacaggaa
      541 ccactgaacg agacaaacag tggagaagga gaaccccaga tctgcagctt cctttctctg
      601 cagatcatgg ggcccttgat tgtgctcgta ggattgtgtt tctttgtggt ggcccatgtt
      661 aagaagaaaa gcaacctgag ttcaagccga gatacctctg aaatcgaagg tggacacacc
      721 cacagtacag aacctgtcca catcactgtg ggtgactcag tgataatatt cccgccccct
      781 ccaccacctt actttgctga gtcttcagca gcagctccct ctcctggggc taacagcctg
      841 caccggatcg aaaacccacc ttcctactcc agtcttttta atctcagcag gaccccaact
      901 cctgagaacc agggagcagc ctctgagaga gatcgggaag tcatatacac catttctggg
      961 ccaggttcat cctccgagag ttcacacact gggcatcttc cgctggacct gcccccgaga
     1021 tatgaagaaa aagagactgc tccagccaca cccttgggtg ccccttctga gtcatcccca
     1081 ccgtgagcta tggactcagg cagatgatgg acagttttat atatatcatg gattgttttt
     1141 tatttaattt ttttaataaa aaatacaata aca
//
