LOCUS       XM_039092230            2349 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 17 (Tmem17),
            transcript variant X3, mRNA.
ACCESSION   XM_039092230
VERSION     XM_039092230.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092230.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2349
                     /gene="Tmem17"
                     /note="transmembrane protein 17; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, 2 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 29 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:360985"
                     /db_xref="RGD:1310566"
     CDS             721..1101
                     /gene="Tmem17"
                     /codon_start=1
                     /product="transmembrane protein 17 isoform X2"
                     /protein_id="XP_038948158.1"
                     /db_xref="GeneID:360985"
                     /db_xref="RGD:1310566"
                     /translation="MELPDPVRQRLSNLSLTMFGDSSRTGPESSEAADNEMVSSLPLQ
                     MSLYFNSYFFPLWWVSCIVMLHLKYSVLPDYYKFIVITVVILITLIEAIRLYLGCMGN
                     LQEKRLRFSEDKDYGTRLNCSQTL"
ORIGIN      
        1 actgaaacaa tacagctgct gtcaaggcag cgagagctgg tttgccatgc atcctggatt
       61 tttctctcca agcccgtgga ggtttccaag attgctgtga ttttcgctgg catacagacc
      121 actggccctg ttgcagctcc aacgctgatc atccactcag tctgctgggt ttccctgagt
      181 ggtcctcagg cgtggaatac aaaagaagct ggaagcgact gcttgggcat gcgtgcggtg
      241 ggcttggtac aacagcttgg gcatgcgtgt tgtgggcttg gtcctggagt agactcgcct
      301 tagagacact tagctccttc caccaaagaa aaagaagctc gtgactgaac taatcatcct
      361 caaggattgt acaaatggcg caccaatttt acggaaaaac tgccttggtg tgagagctcc
      421 ttgtggctca gctcaggacc aaatggctta ttacttgtga tcatcttaag acgctgcagc
      481 tttaaagcaa gacggaggaa ccctccattt tcagcagcac taggccacat tcggcagcgg
      541 gccggtggct cccgctcgcc tctccgcgga gaaggctctg gaggactctg ttccgcgccg
      601 ggcagcccag gaaccaggtc cccagcggcc agcacagccc tgttgccaag ggaaccgcca
      661 cgcgccgctg agctggccca ctagcgggaa cgtgagggga taggcccggg caggccagac
      721 atggagctgc cggaccctgt tcgtcagcgc ttgagcaacc tcagcctcac catgttcggc
      781 gactccagcc gtaccgggcc agagtccagt gaggccgcgg ataacgaaat ggtctccagc
      841 ctgcccctgc agatgtcact ttactttaac tcttactttt tcccactctg gtgggtgagc
      901 tgcatcgtga tgctgcacct gaagtattcg gttttgcctg actactataa attcattgtg
      961 attactgtgg tcatcctcat aaccttgatt gaggccatcc ggctgtacct gggctgcatg
     1021 ggtaacctgc aggagaagag actacgtttc tccgaggaca aggactatgg cacacgtctg
     1081 aactgctcac agaccctata acgtcgtttc tttgtactgc tgagtgcctg actgcataac
     1141 aaaaccgaaa ccatagccta ctgagcttct aactctcgct gtgtgtctgc aggttcccga
     1201 gctggccggc ttttggcttc tgagccttct actgcagttg cctttactcc ttttcctgct
     1261 ccttaatgaa ggcctgaaga atctgccctt ggagaaagcg attcacagca tcttcaccgt
     1321 cttccttact ttccaagtca tctcggcgtt tctgaccctg aagaaaatgg tcaaccagct
     1381 ggcagcccgt ttccacctcc aggacttcga tcagctgtct gcgagcagcg cgactgggag
     1441 gcgggctagg caaagctcgg aagagctctg accgcgtgct gacggtgacg tcaccaagat
     1501 gatgcaagag gacccagaag cgagtgacag gacatcgagt caggcctgag gaagggggca
     1561 cgcgtgttgg ggtgtgtcct ctagctctga agccccccat ggaggaaatg cccaggctta
     1621 ctcgtatcaa ccctgcagcc gaggggatgt ccagactcgg catttcttgt ttctgatgtt
     1681 ggcttcgaag gtgtttcttc atgagtgtgt tggcagttgc aaaaccacct cttctgtcat
     1741 gtttctggtt ataatctgtg atgagaaatg tgtggcactt cagagaaaat cagctttgtc
     1801 cactggaatc tcaccgagtg tgtcaacacc ccctaggaca tgccctaacc cagcaggagt
     1861 tggccaatat aaaacgaact ccgtattctt gtgggctttc tgtttccttt gctgttgcct
     1921 tggcatttct gtcttattat tagagagtaa aaaggtggga aggagttggg aagggggaaa
     1981 catgaaaagt atggtatgaa gaaaagaact aataaaagaa gtacgtgacg tttcttttaa
     2041 acttgtcagc tatctaactg gctgccctgg gcttcttgga tcatatggaa acccttgatc
     2101 aataggatgc ctgtgtgtta ggtggaattt taaccaagac caaagtattg ggtgtgctag
     2161 tactcagttc caagtgtctt tccagttgtt accttgcagt gaaagaggca ggcacatcgt
     2221 ggtgtctgaa gaatatttat cacaaatatt tcaagcttta taaatccatg ttcagtattt
     2281 gtggtgatgg cagctaagtc ctttttacca taaatcgtaa gctctttata ttaaactatc
     2341 agcagcata
//
