LOCUS       NM_001014054            3922 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus transmembrane protein 168 (Tmem168), mRNA.
ACCESSION   NM_001014054 XM_231505
VERSION     NM_001014054.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3922)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3922)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087124.1.
            
            On Apr 20, 2005 this sequence version replaced XM_231505.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087124.1, SRR8487231.160742.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760494, SAMN16676786
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3922
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q21"
     gene            1..3922
                     /gene="Tmem168"
                     /gene_synonym="RGD1307778"
                     /note="transmembrane protein 168"
                     /db_xref="GeneID:312135"
                     /db_xref="RGD:1307778"
     exon            1..200
                     /gene="Tmem168"
                     /gene_synonym="RGD1307778"
                     /inference="alignment:Splign:2.1.0"
     exon            201..1453
                     /gene="Tmem168"
                     /gene_synonym="RGD1307778"
                     /inference="alignment:Splign:2.1.0"
     CDS             326..2419
                     /gene="Tmem168"
                     /gene_synonym="RGD1307778"
                     /codon_start=1
                     /product="transmembrane protein 168"
                     /protein_id="NP_001014076.1"
                     /db_xref="GeneID:312135"
                     /db_xref="RGD:1307778"
                     /translation="MCKSLRYCFSHCLYLAMTRLEEVNREVNMHSSVRYLGYLARFNL
                     LVAICLGLYVRWEKTANSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFL
                     LGLLCFLDNSSFKSDVKEETTKYLLLTSIVLRILCALVERLSGYVRHRPTLLTTVEFL
                     ELVGFAIASTTMLVERSLSVILLVMALAMLIIDLRMKSFLAIPNLIIFSVLLFFSSLE
                     TPQNPIAFACFFICLITDPFLDIYFSGLSVTERWKPFLYRGRICRRLSVVFTGMIELT
                     FFTLSAFKLRDTHLWYFVIPGFSIFGIFWMICHIIFLLTLWGFHTKLNDCHKVYINHR
                     ADNNSLDRIMASKGMRHFCLISEQLVFFSLLATAILGAVSWQPTNGIFLSMFLIVLPL
                     ESMAHGLFHELGNCLGGTSVGYAIVIPTNFCSPDGQPTLLPPEHVQELNLRSTGMLNA
                     IQRFFAYHMIETYGCDYSTSGLSFDTLHSKLKAFLELRTVDGPRHDTYVLYYSGHTHG
                     SGEWALAGGDILRLDTLLEWWREKNGSFCSRLIIILDSENSTPWVKEVRKINDQYVAV
                     QGAELAKTVDIEEADPPQLGDFTRDWVEYNCNSTNNICWTEKGRTVKAMYGVSKRWSD
                     YTLHLPTGSDVAKHWMLHFPRITYPLVHLANWLCGLNLFWMCKACFRCLKRLKMSWFL
                     PTVLDTGQGFKLVKS"
     exon            1454..1596
                     /gene="Tmem168"
                     /gene_synonym="RGD1307778"
                     /inference="alignment:Splign:2.1.0"
     exon            1597..1871
                     /gene="Tmem168"
                     /gene_synonym="RGD1307778"
                     /inference="alignment:Splign:2.1.0"
     exon            1872..3901
                     /gene="Tmem168"
                     /gene_synonym="RGD1307778"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccagcagtc agtggcggaa atatggcggc agtgtccgta ttagagaaag tttctatcga
       61 ggccctgtgg tgctagtgcg ggaggcctca ggctcaggtc cccacaccac ctccaggttc
      121 tgacttggag gcttcgcgcc cttttgtttt gtaagcttcg caacggacgg agagaggctc
      181 ggtggcgacc actgattcag gtcactataa agaaaacttc tgagaaaatg ttggaatagg
      241 cgttaccaac acattggatg cattgaatga aatacagaaa gttagttttt gtgacgtgtg
      301 ggaagccccc cgagcgccag agtacatgtg taaatcactg cgttactgct ttagtcattg
      361 tctctaccta gcaatgacga ggctggaaga agtcaacaga gaagtgaaca tgcattcctc
      421 cgtgcgctat ctcggctatc tagccaggtt caacttactg gtggccattt gtttaggcct
      481 ttatgtgaga tgggagaaaa cagcaaattc tttaattttg gtgattttta ttctcggcct
      541 ctttgtcctt gggatcgcca gcattctcta ctattacttt tcaatggaag cggcaagttt
      601 aagtctctcc aatctctggt ttggatttct gcttggcctc ctgtgttttc ttgataattc
      661 atcctttaaa agtgacgtga aagaagaaac aaccaaatac ttgcttctga cgtctatagt
      721 attgaggata ctgtgtgcgt tggtggagag actttctggt tatgtccgac atcggcctac
      781 tttactaacc acagtagagt ttctggaact tgttgggttt gccatcgcca gcacaaccat
      841 gttggtggag agatctctga gtgtgatctt gcttgtcatg gctttggcca tgctcatcat
      901 cgacctgaga atgaagtcct ttctagctat tccaaactta atcatttttt cagtattgct
      961 atttttctcc tcattggaaa ctccccaaaa tccaattgct ttcgcatgtt tttttatttg
     1021 cctgataact gatccttttc ttgacattta ttttagtgga ctctcagtaa ccgaaaggtg
     1081 gaagcccttt ctgtaccgtg gcagaatttg caggagactt tcggtggttt tcacaggaat
     1141 gatcgagctt acattcttca ctctttcagc atttaaactt agagacactc atctctggta
     1201 tttcgtgata ccaggctttt ccatttttgg aattttctgg atgatttgcc atattatttt
     1261 tcttttaact ctttggggat ttcacaccaa attaaatgac tgccataaag tgtatatcaa
     1321 ccacagggca gataacaaca gccttgacag aatcatggca tccaaaggga tgcggcattt
     1381 ttgcttaatt tcagaacagt tagttttttt tagtcttctt gcaacagcaa ttttgggagc
     1441 cgtctcctgg cagcccacaa atggaatctt cttgagcatg tttcttattg ttttgccact
     1501 ggagtccatg gctcatgggc tcttccatga attaggtaac tgcttaggag gaacgtctgt
     1561 tggatatgct attgtgatcc ctaccaactt ctgcagtcct gatggccagc caacactgct
     1621 tcctccagaa catgttcagg agttaaattt gaggtctact ggcatgctca atgccatcca
     1681 aagatttttt gcatatcata tgattgagac ctatggatgt gactattcca caagtggact
     1741 gtcttttgat actctacatt ccaaactgaa agctttcctt gaactccgga cggtggatgg
     1801 acctagacat gatacatatg ttttatatta tagtggacac acccatggct caggagagtg
     1861 ggctctagca ggtggagaca tacttcgcct tgatacactt ttagaatggt ggagagaaaa
     1921 gaatggttcc ttctgttccc ggcttatcat catattagac agcgagaatt caaccccctg
     1981 ggtgaaagaa gtgagaaaga ttaatgacca gtatgttgca gttcaggggg ctgagctggc
     2041 gaagacagtg gatattgaag aagccgaccc accacagctg ggcgacttta ctagagactg
     2101 ggtcgagtac aactgcaact ccacaaacaa catctgctgg actgagaagg ggcgcacagt
     2161 gaaggctatg tatggtgtgt caaagcgttg gagtgactac actctacact tgccgacagg
     2221 aagtgatgtg gccaagcact ggatgctaca ctttcctcgt attacatatc cattagtgca
     2281 tttggcaaac tggttatgtg gcctgaacct cttttggatg tgcaaagcct gttttaggtg
     2341 cttgaaaaga ttaaaaatga gttggtttct tcctacagtg ctggacacag gacaaggctt
     2401 taaacttgtc aagtcttaat ttggacatca aggaaggata gtatgagagt tcatgttacc
     2461 atttatcagt aacttgccat tttttgtatg ctgtattttt atttgtggga agtattttgc
     2521 tacatttgta gctgctctca ctttgtcttt tcttaagtaa ttatgggatg tgtaagatat
     2581 tgggaatatg catgatttta tactaaaagt atacagaggg tcataaatat gctgaatgta
     2641 aatgtgtaag agatgttaaa agtaacagtg cactttcaga taactttcca tttgtctcca
     2701 atgaaaagaa agttgtctgt gctctgaagt ggccaattga caatttctaa tgccttattt
     2761 tctaggcata cattagagaa tgtagaccag acaagtgtgt tttaagagaa ctaccaattt
     2821 acttcataga agattcttcc atgtgtgtga ttcatgtagg tttgacccca agactgtttg
     2881 cagaagtata aactcttgga gcaggaagag acctgctcat aatgactgca gaatgccctt
     2941 tctccatcac acccaaaagt cttggctatg acctttacca gtacagcaga gaagccacaa
     3001 ctgcctttga gatgaaagca ttattaatgt aggttacaat aagagcttag aggcaacaaa
     3061 gccttccttc atgattagtg agggactttg aaaatactgg taatttgaag agtccttctc
     3121 agggtaattt agttttctta atgagtaata tttccagcta cagattcctt tcaagtaaat
     3181 tgccattctt ttcaaaaagt acacttagaa aataaatgta gcagtttctc attgaccaat
     3241 tcaccctgtc ttaagtattc tgagaagtag tgctctgcca tgaaaattac ttttcagatc
     3301 ctattgtaat aactcttttc tgctgaaggt caaaggatgg gaacagatca ttttgttgtt
     3361 gttgttgtta tatacctgta ttgtattatg taaaaaagta ttcattttgg caattttagg
     3421 taagcataat ggtgaggttg taatttttaa actttaattc agtgttttgt tggagtaaag
     3481 taggcactga tcaggatatt tccttaagag gtaattctct tcctgttccc ttccaataat
     3541 ccttacattt ttagattttc atcttggcaa gagggaggta taattaaatt ggagattaga
     3601 ctttgctaac atggtgactt ctcaccattg aagccatttt tccaggccca gagagagaag
     3661 gtaacgcatc taccatttct accgatgact tgaaaactga cgttttcttt agaaagaagt
     3721 cactccgtca gggaacatgt ataccgctat ctatgcagca ttgcagcagc ctattcctat
     3781 gttttgaata ctgtactctt aatactttga ataatatttt gttaaagatc aatttttcat
     3841 tgaatgtgaa atgaagagtt cctgaatatt ttactgtatt aaaagtggaa gttatacaaa
     3901 aaaaaaaaaa aaaaaaaaaa aa
//
