LOCUS       NM_001399682            3756 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus transmembrane protein 167A (Tmem167a), mRNA.
ACCESSION   NM_001399682 XM_002728992
VERSION     NM_001399682.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3756)
  AUTHORS   Wendler,F., Gillingham,A.K., Sinka,R., Rosa-Ferreira,C.,
            Gordon,D.E., Franch-Marro,X., Peden,A.A., Vincent,J.P. and Munro,S.
  TITLE     A genome-wide RNA interference screen identifies two novel
            components of the metazoan secretory pathway
  JOURNAL   EMBO J 29 (2), 304-314 (2010)
   PUBMED   19942856
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jan 12, 2022 this sequence version replaced XM_002728992.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ213661.1, SRR26643287.4342.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-60                JAXUCZ010000002.1  22933027-22933086
            61-170              JAXUCZ010000002.1  22942386-22942495
            171-205             JAXUCZ010000002.1  22944944-22944978
            206-3756            JAXUCZ010000002.1  22948424-22951974
FEATURES             Location/Qualifiers
     source          1..3756
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q12"
     gene            1..3756
                     /gene="Tmem167a"
                     /note="transmembrane protein 167A"
                     /db_xref="GeneID:100359823"
                     /db_xref="RGD:2323318"
     exon            1..60
                     /gene="Tmem167a"
                     /inference="alignment:Splign:2.1.0"
     CDS             58..276
                     /gene="Tmem167a"
                     /EC_number="3.6.5.4"
                     /note="rCG44733-like"
                     /codon_start=1
                     /product="protein kish-A"
                     /protein_id="NP_001386611.1"
                     /db_xref="GeneID:100359823"
                     /db_xref="RGD:2323318"
                     /translation="MSAIFNFQSLLTVILLLICTCAYVRSLAPSILDRNKTGLLGIFW
                     KCARIGERKSPYVAICCIVMAFSILFIQ"
     exon            61..170
                     /gene="Tmem167a"
                     /inference="alignment:Splign:2.1.0"
     exon            171..205
                     /gene="Tmem167a"
                     /inference="alignment:Splign:2.1.0"
     exon            206..3756
                     /gene="Tmem167a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atcctcttcc gccccggccc ggaagggtga tgtggctgga ccagcaccgg cctcactatg
       61 tctgccattt tcaattttca gagtctattg actgtaatct tgctgcttat atgtacgtgt
      121 gcttatgtgc gatccctggc acccagcatc ctggacagaa ataaaactgg actattgggg
      181 atattttgga agtgtgcccg aattggtgaa cgcaagagtc cttatgtcgc catatgctgt
      241 atagtgatgg ccttcagcat cctcttcata cagtagcttt ggaaactacc agcacgtgat
      301 tgccatcaga ctgtacacag gacgtgcctc cagaaaataa cgggagaatg gttaagcctc
      361 ttgtctctga acatggaatg agataaattt cgagatgctg ttctctcttt ttatgctatt
      421 ggaccaatga gctgtatgaa taattacgat gtaacagtta atacatagga acgtgattgc
      481 agccatcgac ctcggttctc tcactccagt attacactct acaaacgtca tcctgttacg
      541 tcaggaccgc ttttcctaag gttctccagg cacgaagtag aaacccagtg gccagttcca
      601 caggcttctt tgactagggc ttcaaaataa tgtcttcaca cagtgatacc ttctagcgac
      661 tggcctattt ttattgagaa aagaaaatgg ttctattttt gttgttactg ttcttaggaa
      721 ttgcattcat atttaaaccc ttttgattgc taaccagagt acctctattc ttggcaaatt
      781 ctgtacttta ttacaggtgt ttaaaatagt ttaaacaaaa ctgcatttct ttaattagcc
      841 ttagagttgg gcttctagtc acatatgtat ggctgccatc ctgtgaagga gagtatctta
      901 gaatgacaaa agcggcaagc agaacgatga ctgaatatgc attatacatt tttcgttctc
      961 tgtggtattg agtcttccaa atagaacatc catgtagtta cccaaatgcg ttatttgtgg
     1021 tgtttttaat gcagcacttt gcttctggtt tatgtcctgt cagcgtgaac tggaatctct
     1081 tctgtaactt tgtaggtgat aaacatacct catactgctt agtctgggta ctgtgctctc
     1141 agtgtatttc agctttcaca cagattggga atagacacaa gtgaagcata catattcaaa
     1201 ggatacgtgc aggtttgtgt ccaacatttc ttcaggtcag ctgaaagtca ctcactactt
     1261 caaagcaaag aggaagtaaa tcctagctgg aagcacttca tagcatttat taattaatta
     1321 ctgggttcga ctgctccttt aaaagttaaa aaaaaaaaaa agaaaaaaga aaaccttttt
     1381 cttagaagtg aggtttctat aaaagccaag cgttggactt gaagacttat tgtaaagcag
     1441 tataccactg tgcagcccaa atgaccacca cagctagcta aaccaccagc tttgaaatag
     1501 tgctctaggc cccatggatt acagtctaga ctaaggtcta ggaaagctta cttggtgtat
     1561 tttacgggtt gcttgttttc caaaagatct ttgcaatgtc tatatctagt taaaactggt
     1621 ctaatttact ttgaatgtga aatcaggtta tgataattac tctactctga aatttacctt
     1681 gggcttagta ttaggtcaaa gattttcact gtgtcccaaa agtaggactc tctcctctgc
     1741 acattaagta gtcacctttc agggttcgat ttttggttgg ccatctgttc atctccacta
     1801 ccaactgaag tttccagaaa tgtggtcaac ttctttccta agttaacata catctcataa
     1861 aaatggagag aataaagagt tgtctttagt ttgacatttt agacaatgta ggtggaaatt
     1921 agagaaagac atagttaact tgaagcttcc aggtaacata agactttcat cattacgtag
     1981 attctgggca ttctgggcag gtatttctag tccccaccct cctgaacgtt tacagtacag
     2041 gcactttgga ggtgtaggaa ggctgcaaag acaaagatct tacaaagaaa tgcaattagc
     2101 atttttgatg tgcaaacagt gactcctgtt ttctaagcca cagggtcctg tgggaggtgt
     2161 gaagcccaca gaatagttag ctgtctttgt tagtggggtg tggaggagca gtaaagcacg
     2221 ccaggcagct ggcctttgca cagacggtaa acacagtgta ggtggcaata gggggcgaga
     2281 ggcactaaga cccaggcctg acaatgttca gatgttcgcc ctagctactt tgttggctct
     2341 agaaccttga agccatgtct ccagatttgt tttgttttgg gttccccatt tgtttcatct
     2401 gtgtcattga caggcaagga gacatgtatt ccttccaggt agtcttgcaa gaggggcaaa
     2461 aaggccttgt gttaaattgg ttttaatagt tttaaaaagt taaaatatca attcggtgtc
     2521 ttgctgatgt ctttaatatg ctggaaacta ccatatatgt ttcaattcaa ggtgtttcct
     2581 gctggggtta gtaagaatat ttataaattt ataataaatt tgtttatctt cttaataaaa
     2641 ttagtcttgt accatagggt gacacagatt cccatacatt aactttttca agtttacaaa
     2701 gtcaaacaaa tctgcctcca tttgtgaaaa ttatttaata cttattaata atattttttt
     2761 caggaaacat gtacacaatt ggtatggcat gtgaccattg aaaataaatg agtagttgat
     2821 ctgtattcat agtgtccatg aaagatgaaa tgaatgtcta tgaagtataa tgtgctaaca
     2881 cttattcttg agataatccc agcattcttt aaaaaaaaaa aaaaggaaga gtgaagatgc
     2941 attgtgggta gaacgtctca gagaacatgg attaaacgga acttgacagt gttgttttaa
     3001 aaacacaatt ctgtgtttgg gattatatgt cccttagttt gttgtggcac atgtgaagta
     3061 tggcgtggcc agacagatgt tatatcctgg aaagtcatgt attttaccta cctcaaaact
     3121 gaagctgaga gtttgtttcc cctcctgcct cacaaatcct tcaggaggat aataaaatct
     3181 cccttggttt atgagcaagc aaagttgaca aagggataca ctagtagatt ctcctgagac
     3241 ttttgtaaac attgtagagg caactggcca atgaaggctg tgttttcagt aaaatcccat
     3301 attctagctg ctaaatgcag ccccagctgt taaaacaaac atccatccca aaagtgcact
     3361 gtttacattt cctggacata cagaaaatat ttctacttat caagaactta agctccacaa
     3421 aaggctttga gaagttaccc aacccttgaa atctgaaaac atgaatggaa aattcttagg
     3481 ggttgttctt ctgttccttt ggtatcatct agtaataata aatgttctca aaatggtgct
     3541 agcagtcacc gtggcaacag ggagtcatga ctaacttctg agaaataact tcatatcatt
     3601 tccactttgc cctaaactag ttcctaaata atctggaaga gcatttcagt accttttgga
     3661 gaaagaacta taattcatgt ttaaaagagg aggtaatcat cttagtctct ggttagttta
     3721 cgtgcctgct atgtaataaa aaatgaactg tcaaaa
//
