LOCUS       XM_039099940            4812 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 164 (Tmem164),
            transcript variant X6, mRNA.
ACCESSION   XM_039099940
VERSION     XM_039099940.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039099940.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4812
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4812
                     /gene="Tmem164"
                     /gene_synonym="RGD1563286"
                     /note="transmembrane protein 164; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 44 ESTs, 1 long SRA read, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 175 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:367763"
                     /db_xref="RGD:1563286"
     CDS             257..703
                     /gene="Tmem164"
                     /gene_synonym="RGD1563286"
                     /codon_start=1
                     /product="transmembrane protein 164 isoform X5"
                     /protein_id="XP_038955868.1"
                     /db_xref="GeneID:367763"
                     /db_xref="RGD:1563286"
                     /translation="MHMLNGALLALLFPVVNTRLLPFELEIYYIQHVMLYVVPIYLLW
                     KGGAYTPEPLSNFHWALLSTGLMFFYHFSILQILGLVTEVNLNNMLCPAISDPFYGPW
                     YRIWASGHQTLMTMTHGKLVILFSYMAGPLCKYVLDLLRLPAKKID"
ORIGIN      
        1 agagagggag gggaaaccgg aggaagcgag cggcggctgc tgggggagga aggcaaggag
       61 gaggagccgt gagcggcggc gctggcggct gctgctgctg cggccgcctg gggagcccag
      121 ccgagtgccg cctggggctg cagggagtgc ggggagacag agagttcggt ggagcccggg
      181 cggcggagct gtgcggcgga tcttcctcct ggcctgtcct ccatgcccgg gagctaccgt
      241 catcttcaag ttacagatgc acatgttgaa tggagctctt ctggcattgc tctttcctgt
      301 ggtaaatacc cggctgctcc cctttgaact agagatttac tacatccagc atgtaatgct
      361 ctacgtggtc cccatctacc tgctttggaa aggaggtgct tacaccccag agcccctcag
      421 caatttccac tgggctcttc tctcgactgg cctcatgttc ttttaccact tcagcatcct
      481 gcagatcctc ggcctggtca ccgaagtgaa tttgaacaac atgctgtgtc cggccatctc
      541 agacccattc tacggcccct ggtatcgcat ctgggcctcg ggacaccaga ctctcatgac
      601 catgacccac gggaagctgg tcatcctgtt ctcatacatg gctgggccct tgtgtaaata
      661 tgtgctggat ttgctccggc ttccagccaa gaaaatagac tgaaggtgct tggatttttg
      721 ttttgtttta gttttgggtt ttttttgttt tgttttgttt tgttttgttt tgtttcgttt
      781 ctccctgaga aagcaaatcc tgacttgatt cagagaatac ccagctcttg acaaaatcat
      841 tggagagggc aaacagaata cttggtttat ttcctccccc cccccccttc tctgtccctt
      901 tcttccacta ctcttccctc cccagctcca acccttggat gactcttggt gcccagggaa
      961 ggtgctgggg gctggagctt acttcttctc ctcccctggg ttctgggtcc ctactgtgcc
     1021 ccactccgtc tgcgtggcct tacccaggga aatggtagtt agtggcccct ttcatacggc
     1081 ttgttggtgc ttttaacaac agctggttga ggaaggaggg ggcaacaagc agtagttcct
     1141 ccagcatccc agccataaaa tagtgttggg ttcatgtctc tactgccagg gacctccagg
     1201 ctcatgctgg aatccccttt aatctccagc atagccccca ccagaagggg accaaggcct
     1261 tgcttctaca ccagccgcaa gcccagagcc aagggacttc ccagttcaca gccaaaatat
     1321 gattcttcca gtgactggtg tcccatgact gaaagcaggg agctacccag ccactccttc
     1381 tagggtgccg cctggggtag atggcagcaa cgcgcagcca aagggcaaga ttctgtacag
     1441 gggtgtggaa gatctgttgc cacaatgaat ctgaaagaaa gagggtaaag gtgtacatag
     1501 taccaggctg aaccaccctg tcccccaggg ggaaaaaaaa caaacaaacc aaactttccc
     1561 tatgaaagct gaggtcagat ccccatccga catgagtgta gaaaggaaga aatcaactaa
     1621 atcaagtggc aacttgagaa agctgtgatc tgaatcacat tctgtatcac aaggataata
     1681 gacagtgttc tagtctcagc tgccccttga accatcctca ttgtctgtgt atgtgtctgt
     1741 ctgtttttct gtctgaggca gcttcatgga agaacaagct ggagttgggg cttgggtgca
     1801 gtttggctgt ttgtcttttg gatgtttgaa atgggggaaa ccctcacttt tctctaaggt
     1861 actatcgagc cattcctggc acttagaaga catggccatg gttcctgaag gcagttttat
     1921 gaggattaga tttctttcgt gtagcttgac tctactcaag tgttctatgt ggggagacgt
     1981 cactggtttt gcagcttgac aatgtccaaa acccacatgt aggttgaaag ggaactgcct
     2041 gggccccata ggtagaggtt caagtgctcg gaagagagga gctttggttg aaaggtactt
     2101 ggttgtgtgt gaaccacaca aatggtacca gtgtctgtgt atttgctgac tcctcgtcaa
     2161 cttctagtag aaagagattt gattaggaat agaaatgttt gtaccatgac caccccattg
     2221 tcttgtacca gatgcagtat tcagtgtgag tttgtgggta ttaggcctat gctgaccttc
     2281 agtggcttgg tggtcatggt tttacaagat ggatttgcag gggaagcaac tgcaggagag
     2341 caaatggaaa ctaagagaag ccattctggg agaggccgcc tggccatgaa gtgatctagt
     2401 ctgaggtact gaaaacaggc aagaactctt agtatgcttg ctacccttga tttcctgcca
     2461 tggcatcttc accctctgcc atctgtgagg gccatgccaa gcttcccttg ctgtctcttc
     2521 aggtactgac tagccctgct cactcataga agttggtgga tgaatagatt gcaggaacgc
     2581 cgccctggcc tgtaagagta tggagaggtc ataggagggg agtccatggg gcctgacaga
     2641 gctgttacca caacatgttg ctgctacctg cagtgatgga cggcctcagc tgaggggacc
     2701 aactccagaa tgccacagaa gtgggagtgc catacacact tctttcccat ctgaggcttc
     2761 atggtccagg ttgccaggca ccttgggtct ccctatatca tcagtctgct ttcgtgccag
     2821 ctcagcagac cattttctgg tagtcatttc tggtgctcag aggaagagag gaaacccaaa
     2881 gccatgttgc ctggcatggc tcatacataa ggaagctaaa tgaaacattg tcgctccttc
     2941 aacagactcc atagggagac agcctggttg tgagaagttg gagaacaggg aacctcttca
     3001 ctatctatag atctcactct taccttggtc caaacctaca tggaaagagg taacctgcct
     3061 aggctcttac aactttgcca agggagttgt ccctaggtac gtccagctgg taccctctac
     3121 tgtctgtagt acagggacag agaagacagt ttgccctgac attgaagctt ctccttgggc
     3181 ctgtcatccc cttaccacct tagccaaagt tttatatgtg ctcgaccatc atgtgtgagc
     3241 tctgtgtctg ttcgagagag ctcagagagg tagctagcaa gaaggaacgg tgtatcttca
     3301 agccctcatt gtctgtggtc agggggctgc accaacaagt acagttggct aagccagctt
     3361 ctctgattat aggtccttcc tggccccagt gtttgcttgt gtatataaaa gacttggccc
     3421 aacgtcttct cagaagccta gcagcatgtt cttctgttat cctgtgacaa gctgtggggt
     3481 tggggagcca ctacccacct ctctaagtct gtcttctgtc tttttgtaaa attctttgta
     3541 cctgtggggg tggtctatgg ggtctatgtg ggctaagtag ggttggctat gcactttatt
     3601 ctatggttcc tcagcctacc tgtcagacca tcccttttgc tgtagcctct gtcaggggtt
     3661 tgctatgtgt gatcatggat aattcagagt ttcgtgatgt aattacaagt ttctctcaga
     3721 tagttcaatg tcagcagagc tctctataca gtggaccccg gggttgggga atgccctgag
     3781 ctgtgctggg ctgggtgctc aggagttggc aaaggacccc ttttaacttt cctgctgcca
     3841 aaaagatttc tttgggaatt ctgtcacctg tcctttttgg gacaagggtt tcttaatggt
     3901 ttctactgta agggaggcgg ggtggggggg agtaaaggag gaattcagat gctcttggac
     3961 aagacactgc ttctggtttt agtgagccag gaccaagcct caggaagttc ccaaaccaga
     4021 ctaggaagga gtgccctatc tcctcctggc ccagccatct ctggggtaaa agtccattag
     4081 aggagtcagg cttcctctgg tataggcaac gagttcgcta tgcacaggaa gaccgagttg
     4141 cttgccgttg cccttgtttg tgacacttgt acactgattt gccactcatg gcactgagca
     4201 gacacccatc cctactcaat gaaaaacgaa tcaaaaacaa aagtcctttg aagcctaaga
     4261 tgatgttttg gaaaactctt gatttatttt ggtgtcaacg ttatgttaga tttgaaagca
     4321 tttttcattt atttgatgta attgtagcga aaagaacagg attgaatggt gtacagttat
     4381 ttcttctggg acatttcacc gatgtcctgt cctccatcct tcttctcaag ctgagactgc
     4441 cgtgtactat caccctaatg tacagggctc ttctgagagc ccctctgtga actctctcga
     4501 tggcagccaa atcgagcctc tttgtcaggc tgcttctggg gcgttcatcc ccaacccctc
     4561 cagtctacct cccctcttcg ggtgtttttg taatgtgctt tctctgtttt gtaaaacccc
     4621 tttgattgta atgaagtggt ttctgcagcc accttttgga aataaatggc ccttaatttg
     4681 tgtacttagc attttgaatc ttagcctcag gtgtttctgc tgttgaagat tcctgaatga
     4741 aaaggaaccc tcccatggga cttattgtta caatgttttc ttcatttact gttattaaaa
     4801 gatttatgag aa
//
