LOCUS       XM_008773426            5438 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 164 (Tmem164),
            transcript variant X1, mRNA.
ACCESSION   XM_008773426
VERSION     XM_008773426.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008773426.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008773426.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5438
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5438
                     /gene="Tmem164"
                     /gene_synonym="RGD1563286"
                     /note="transmembrane protein 164; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 45 ESTs, 3 long SRA reads, 7 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 175 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:367763"
                     /db_xref="RGD:1563286"
     CDS             439..1329
                     /gene="Tmem164"
                     /gene_synonym="RGD1563286"
                     /codon_start=1
                     /product="transmembrane protein 164 isoform X1"
                     /protein_id="XP_008771648.1"
                     /db_xref="GeneID:367763"
                     /db_xref="RGD:1563286"
                     /translation="MSRYSYQSLLDWLYGGVDPSFAGNGGPDCAAFLSWQQRLLESVV
                     VLTLALLEILVALRHILRQKEDGRGGRSSQPQQVTQRPEEGKESLSKNLLLVALCLIF
                     GVEVGFKFATKTVIYLLNPCHLVTMMHIFLLACPPCPGATVIFKLQMHMLNGALLALL
                     FPVVNTRLLPFELEIYYIQHVMLYVVPIYLLWKGGAYTPEPLSNFHWALLSTGLMFFY
                     HFSILQILGLVTEVNLNNMLCPAISDPFYGPWYRIWASGHQTLMTMTHGKLVILFSYM
                     AGPLCKYVLDLLRLPAKKID"
ORIGIN      
        1 ggctgctggg ggaggaaggc aaggaggagg agccgtgagc ggcggcgctg gcggctgctg
       61 ctgctgcggc cgcctgggga gcccagccga gtgccgcctg gggctgcagg gagtgcgggg
      121 agacagagag ttcggtggag cccgggcggc ggagctgtgc ggcggattgg ccaacggctc
      181 ctttcaaccc tgcctcgttg gtggccactg gagaagcgcg gggggctccc cagacagccg
      241 tggggacaag ttagagccag cactttaccc cgggcctcgc gtgtagcttt ccctcccctg
      301 ttctaggtgc cccagtgtcc agaggggggg tgcgggtgtg ccctccttac atgttccacc
      361 gcccgggcaa cccttctgtc tcgtgttcca tctcgctctt gcttcctgta ccgtagtcaa
      421 gtggagccac tttgcatcat gtcccggtat agctaccaaa gtctcctgga ctggctctat
      481 gggggcgtcg accccagttt tgcaggcaat gggggccccg actgtgctgc cttcctgtct
      541 tggcagcagc ggctgctgga aagtgtggtg gtcctgaccc tggccctgtt ggagatcctg
      601 gtggccctgc ggcacatcct gaggcagaag gaggacggta ggggtggccg tagcagccag
      661 ccacagcagg tgacccagcg gccagaggaa ggcaaggaga gcctgagcaa gaatctgctc
      721 ttagtagccc tgtgcctgat cttcggggtg gaggtgggct ttaagttcgc caccaagacc
      781 gtcatctacc tgctcaaccc ttgtcacctg gtcaccatga tgcatatctt cctcctggcc
      841 tgtcctccat gcccgggagc taccgtcatc ttcaagttac agatgcacat gttgaatgga
      901 gctcttctgg cattgctctt tcctgtggta aatacccggc tgctcccctt tgaactagag
      961 atttactaca tccagcatgt aatgctctac gtggtcccca tctacctgct ttggaaagga
     1021 ggtgcttaca ccccagagcc cctcagcaat ttccactggg ctcttctctc gactggcctc
     1081 atgttctttt accacttcag catcctgcag atcctcggcc tggtcaccga agtgaatttg
     1141 aacaacatgc tgtgtccggc catctcagac ccattctacg gcccctggta tcgcatctgg
     1201 gcctcgggac accagactct catgaccatg acccacggga agctggtcat cctgttctca
     1261 tacatggctg ggcccttgtg taaatatgtg ctggatttgc tccggcttcc agccaagaaa
     1321 atagactgaa ggtgcttgga tttttgtttt gttttagttt tgggtttttt ttgttttgtt
     1381 ttgttttgtt ttgttttgtt tcgtttctcc ctgagaaagc aaatcctgac ttgattcaga
     1441 gaatacccag ctcttgacaa aatcattgga gagggcaaac agaatacttg gtttatttcc
     1501 tccccccccc cccttctctg tccctttctt ccactactct tccctcccca gctccaaccc
     1561 ttggatgact cttggtgccc agggaaggtg ctgggggctg gagcttactt cttctcctcc
     1621 cctgggttct gggtccctac tgtgccccac tccgtctgcg tggccttacc cagggaaatg
     1681 gtagttagtg gcccctttca tacggcttgt tggtgctttt aacaacagct ggttgaggaa
     1741 ggagggggca acaagcagta gttcctccag catcccagcc ataaaatagt gttgggttca
     1801 tgtctctact gccagggacc tccaggctca tgctggaatc ccctttaatc tccagcatag
     1861 cccccaccag aaggggacca aggccttgct tctacaccag ccgcaagccc agagccaagg
     1921 gacttcccag ttcacagcca aaatatgatt cttccagtga ctggtgtccc atgactgaaa
     1981 gcagggagct acccagccac tccttctagg gtgccgcctg gggtagatgg cagcaacgcg
     2041 cagccaaagg gcaagattct gtacaggggt gtggaagatc tgttgccaca atgaatctga
     2101 aagaaagagg gtaaaggtgt acatagtacc aggctgaacc accctgtccc ccagggggaa
     2161 aaaaaacaaa caaaccaaac tttccctatg aaagctgagg tcagatcccc atccgacatg
     2221 agtgtagaaa ggaagaaatc aactaaatca agtggcaact tgagaaagct gtgatctgaa
     2281 tcacattctg tatcacaagg ataatagaca gtgttctagt ctcagctgcc ccttgaacca
     2341 tcctcattgt ctgtgtatgt gtctgtctgt ttttctgtct gaggcagctt catggaagaa
     2401 caagctggag ttggggcttg ggtgcagttt ggctgtttgt cttttggatg tttgaaatgg
     2461 gggaaaccct cacttttctc taaggtacta tcgagccatt cctggcactt agaagacatg
     2521 gccatggttc ctgaaggcag ttttatgagg attagatttc tttcgtgtag cttgactcta
     2581 ctcaagtgtt ctatgtgggg agacgtcact ggttttgcag cttgacaatg tccaaaaccc
     2641 acatgtaggt tgaaagggaa ctgcctgggc cccataggta gaggttcaag tgctcggaag
     2701 agaggagctt tggttgaaag gtacttggtt gtgtgtgaac cacacaaatg gtaccagtgt
     2761 ctgtgtattt gctgactcct cgtcaacttc tagtagaaag agatttgatt aggaatagaa
     2821 atgtttgtac catgaccacc ccattgtctt gtaccagatg cagtattcag tgtgagtttg
     2881 tgggtattag gcctatgctg accttcagtg gcttggtggt catggtttta caagatggat
     2941 ttgcagggga agcaactgca ggagagcaaa tggaaactaa gagaagccat tctgggagag
     3001 gccgcctggc catgaagtga tctagtctga ggtactgaaa acaggcaaga actcttagta
     3061 tgcttgctac ccttgatttc ctgccatggc atcttcaccc tctgccatct gtgagggcca
     3121 tgccaagctt cccttgctgt ctcttcaggt actgactagc cctgctcact catagaagtt
     3181 ggtggatgaa tagattgcag gaacgccgcc ctggcctgta agagtatgga gaggtcatag
     3241 gaggggagtc catggggcct gacagagctg ttaccacaac atgttgctgc tacctgcagt
     3301 gatggacggc ctcagctgag gggaccaact ccagaatgcc acagaagtgg gagtgccata
     3361 cacacttctt tcccatctga ggcttcatgg tccaggttgc caggcacctt gggtctccct
     3421 atatcatcag tctgctttcg tgccagctca gcagaccatt ttctggtagt catttctggt
     3481 gctcagagga agagaggaaa cccaaagcca tgttgcctgg catggctcat acataaggaa
     3541 gctaaatgaa acattgtcgc tccttcaaca gactccatag ggagacagcc tggttgtgag
     3601 aagttggaga acagggaacc tcttcactat ctatagatct cactcttacc ttggtccaaa
     3661 cctacatgga aagaggtaac ctgcctaggc tcttacaact ttgccaaggg agttgtccct
     3721 aggtacgtcc agctggtacc ctctactgtc tgtagtacag ggacagagaa gacagtttgc
     3781 cctgacattg aagcttctcc ttgggcctgt catcccctta ccaccttagc caaagtttta
     3841 tatgtgctcg accatcatgt gtgagctctg tgtctgttcg agagagctca gagaggtagc
     3901 tagcaagaag gaacggtgta tcttcaagcc ctcattgtct gtggtcaggg ggctgcacca
     3961 acaagtacag ttggctaagc cagcttctct gattataggt ccttcctggc cccagtgttt
     4021 gcttgtgtat ataaaagact tggcccaacg tcttctcaga agcctagcag catgttcttc
     4081 tgttatcctg tgacaagctg tggggttggg gagccactac ccacctctct aagtctgtct
     4141 tctgtctttt tgtaaaattc tttgtacctg tgggggtggt ctatggggtc tatgtgggct
     4201 aagtagggtt ggctatgcac tttattctat ggttcctcag cctacctgtc agaccatccc
     4261 ttttgctgta gcctctgtca ggggtttgct atgtgtgatc atggataatt cagagtttcg
     4321 tgatgtaatt acaagtttct ctcagatagt tcaatgtcag cagagctctc tatacagtgg
     4381 accccggggt tggggaatgc cctgagctgt gctgggctgg gtgctcagga gttggcaaag
     4441 gacccctttt aactttcctg ctgccaaaaa gatttctttg ggaattctgt cacctgtcct
     4501 ttttgggaca agggtttctt aatggtttct actgtaaggg aggcggggtg ggggggagta
     4561 aaggaggaat tcagatgctc ttggacaaga cactgcttct ggttttagtg agccaggacc
     4621 aagcctcagg aagttcccaa accagactag gaaggagtgc cctatctcct cctggcccag
     4681 ccatctctgg ggtaaaagtc cattagagga gtcaggcttc ctctggtata ggcaacgagt
     4741 tcgctatgca caggaagacc gagttgcttg ccgttgccct tgtttgtgac acttgtacac
     4801 tgatttgcca ctcatggcac tgagcagaca cccatcccta ctcaatgaaa aacgaatcaa
     4861 aaacaaaagt cctttgaagc ctaagatgat gttttggaaa actcttgatt tattttggtg
     4921 tcaacgttat gttagatttg aaagcatttt tcatttattt gatgtaattg tagcgaaaag
     4981 aacaggattg aatggtgtac agttatttct tctgggacat ttcaccgatg tcctgtcctc
     5041 catccttctt ctcaagctga gactgccgtg tactatcacc ctaatgtaca gggctcttct
     5101 gagagcccct ctgtgaactc tctcgatggc agccaaatcg agcctctttg tcaggctgct
     5161 tctggggcgt tcatccccaa cccctccagt ctacctcccc tcttcgggtg tttttgtaat
     5221 gtgctttctc tgttttgtaa aacccctttg attgtaatga agtggtttct gcagccacct
     5281 tttggaaata aatggccctt aatttgtgta cttagcattt tgaatcttag cctcaggtgt
     5341 ttctgctgtt gaagattcct gaatgaaaag gaaccctccc atgggactta ttgttacaat
     5401 gttttcttca tttactgtta ttaaaagatt tatgagaa
//
