LOCUS       XM_039103416            1196 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 161B (Tmem161b),
            transcript variant X10, mRNA.
ACCESSION   XM_039103416
VERSION     XM_039103416.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103416.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1196
                     /gene="Tmem161b"
                     /note="transmembrane protein 161B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 56 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:309953"
                     /db_xref="RGD:1309660"
     CDS             146..1087
                     /gene="Tmem161b"
                     /codon_start=1
                     /product="transmembrane protein 161B isoform X6"
                     /protein_id="XP_038959344.1"
                     /db_xref="GeneID:309953"
                     /db_xref="RGD:1309660"
                     /translation="MGVIGIQLVVTMVMASVMQKIIPHYSLARWLLCNGSLRWYQHPS
                     EEELRILAGKQQKGKSKKDRKYNGHIENKPLTIPKDIDLHLETKSVTEVDTLALHYFP
                     EYQWLVDFTVAATVVYLVTEVYYSFMKPTQEMNISLVWCLLVLSFAIKVLFSLTTHYF
                     KVEDGGERSVCVTFGFFFFVKAMAVLIVTENYLEFGLETGFTNFSDTAMQFLEKQGLE
                     SQGPVSKLTFKFFLAVFCSLIGAFLTFPGLRLAQMHLDALNLATEKITQTLLHINFLA
                     PLFMVLLWVKPITKDYIMNPPLGKESVPLAPYQLSDL"
ORIGIN      
        1 agggaggaac ttcctgtccc gtgcgggcag gacttccggc cgaggcggaa gaccttttcc
       61 ctcgcgtttt ctggagatcc gttttgcaga acctggaggg gcgagtcggg accgtactgt
      121 ggactctaga gtgtctatag gcgttatggg tgtgataggt atacagctgg ttgttaccat
      181 ggtgatggcc agtgtcatgc agaagattat acctcactat tctcttgctc gatggctact
      241 ctgtaatggc agcttgagat ggtatcaaca cccttccgaa gaagaattaa gaatccttgc
      301 agggaagcag cagaaaggaa aaagtaaaaa agacagaaaa tacaatggcc atattgaaaa
      361 taagccacta accattccaa aagatattga ccttcatcta gaaaccaagt ccgttacaga
      421 agtggatact ttagcactgc attactttcc agaataccag tggctggtgg acttcacggt
      481 ggctgctact gttgtgtatt tagtaactga agtctattac agctttatga agcccacaca
      541 ggaaatgaat atcagcttag tctggtgcct cctggttttg tcttttgcaa tcaaagttct
      601 attttcatta actacacact attttaaagt agaagatgga ggtgagaggt cagtttgtgt
      661 cacctttgga ttttttttct tcgttaaagc aatggcagtt ttgatcgtaa cagagaacta
      721 cctggagttt ggacttgaaa cagggtttac aaatttttca gacactgcga tgcagtttct
      781 tgaaaagcaa ggtttagaat ctcagggtcc tgtttcaaaa cttactttca aatttttcct
      841 ggctgttttc tgttcactca ttggggcttt tttgacattt cctggattac ggctggctca
      901 aatgcatctg gatgccctga atttggcaac agaaaaaatt acacaaacat tacttcatat
      961 caacttcttg gcacctttat ttatggttct gctctgggtg aaaccaatca ccaaagacta
     1021 catcatgaac ccaccattgg gtaaagagag tgtcccttta gcaccatatc aactttctga
     1081 tctctagaat gacagaagcc acattcgata ctcttcgact ctggttaata gttctgctat
     1141 gtgttttgcg gttggccatg atgcgaagtc acttgcaagc gtatttaaac ttggcc
//
