LOCUS       XM_008760644            2667 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 161B (Tmem161b),
            transcript variant X1, mRNA.
ACCESSION   XM_008760644
VERSION     XM_008760644.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008760644.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2667
                     /gene="Tmem161b"
                     /note="transmembrane protein 161B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     ESTs, 3 long SRA reads, 8 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 180 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:309953"
                     /db_xref="RGD:1309660"
     CDS             225..1688
                     /gene="Tmem161b"
                     /codon_start=1
                     /product="transmembrane protein 161B isoform X1"
                     /protein_id="XP_008758866.1"
                     /db_xref="GeneID:309953"
                     /db_xref="RGD:1309660"
                     /translation="MGVIGIQLVVTMVMASVMQKIIPHYSLARWLLCNGSLRWYQHPS
                     EEELRILAGKQQKGKSKKDRKYNGHIENKPLTIPKDIDLHLETKSVTEVDTLALHYFP
                     EYQWLVDFTVAATVVYLVTEVYYSFMKPTQEMNISLVWCLLVLSFAIKVLFSLTTHYF
                     KVEDGGERSVCVTFGFFFFVKAMAVLIVTENYLEFGLETGFTNFSDTAMQFLEKQGLE
                     SQGPVSKLTFKFFLAVFCSLIGAFLTFPGLRLAQMHLDALNLATEKITQTLLHINFLA
                     PLFMVLLWVKPITKDYIMNPPLGKESVPLMTEATFDTLRLWLIVLLCVLRLAMMRSHL
                     QAYLNLAQKCVDQMKKEAGRISTVELQKMVARVFYYLCVIALQYVAPLVMLLHMTLLL
                     KTLGNHSWGIYPEAVSPLPVDNNLPSNLVYPELPSPDGKMKVTVMQITVALSSLKNIF
                     TPLLFRGLLSFLTWWIAACLFSTSLFGLFYHQYLTVA"
ORIGIN      
        1 cacacccacg gaagtagctt taaaggacgc cttgcgtctc ctcctctctg cgtggcgtgg
       61 ggtcgctggc ggtcaggaga gggaggaact tcctgtcccg tgcgggcagg acttccggcc
      121 gaggcggaag accttttccc tcgcgttttc tggagatccg ttttgcagaa cctggagggg
      181 cgagtcggga ccgtactgtg gactctagag tgtctatagg cgttatgggt gtgataggta
      241 tacagctggt tgttaccatg gtgatggcca gtgtcatgca gaagattata cctcactatt
      301 ctcttgctcg atggctactc tgtaatggca gcttgagatg gtatcaacac ccttccgaag
      361 aagaattaag aatccttgca gggaagcagc agaaaggaaa aagtaaaaaa gacagaaaat
      421 acaatggcca tattgaaaat aagccactaa ccattccaaa agatattgac cttcatctag
      481 aaaccaagtc cgttacagaa gtggatactt tagcactgca ttactttcca gaataccagt
      541 ggctggtgga cttcacggtg gctgctactg ttgtgtattt agtaactgaa gtctattaca
      601 gctttatgaa gcccacacag gaaatgaata tcagcttagt ctggtgcctc ctggttttgt
      661 cttttgcaat caaagttcta ttttcattaa ctacacacta ttttaaagta gaagatggag
      721 gtgagaggtc agtttgtgtc acctttggat tttttttctt cgttaaagca atggcagttt
      781 tgatcgtaac agagaactac ctggagtttg gacttgaaac agggtttaca aatttttcag
      841 acactgcgat gcagtttctt gaaaagcaag gtttagaatc tcagggtcct gtttcaaaac
      901 ttactttcaa atttttcctg gctgttttct gttcactcat tggggctttt ttgacatttc
      961 ctggattacg gctggctcaa atgcatctgg atgccctgaa tttggcaaca gaaaaaatta
     1021 cacaaacatt acttcatatc aacttcttgg cacctttatt tatggttctg ctctgggtga
     1081 aaccaatcac caaagactac atcatgaacc caccattggg taaagagagt gtccctttaa
     1141 tgacagaagc cacattcgat actcttcgac tctggttaat agttctgcta tgtgttttgc
     1201 ggttggccat gatgcgaagt cacttgcaag cgtatttaaa cttggcccag aaatgtgtgg
     1261 atcaaatgaa gaaagaagca ggccgaataa gtacagtgga gctacagaaa atggtagcgc
     1321 gagtctttta ttacctgtgt gtcattgccc tgcaatatgt ggcacctctg gtgatgctgc
     1381 ttcacatgac tctgcttctg aaaacactag gtaatcattc ctgggggatt tatccagaag
     1441 ctgtttctcc cttgccagtg gataataatc tcccatccaa cttggtttac cctgaactac
     1501 catcacctga tgggaagatg aaggtaactg ttatgcaaat cacagtggcg ttgagcagct
     1561 taaaaaacat cttcacgcct ctcctttttc gaggacttct gtcatttttg acatggtgga
     1621 ttgctgcttg cctcttttct acaagccttt ttgggctttt ctatcatcag tatctgacag
     1681 tggcatgaat ttcagtcaaa aatggatatc caagtcacac tttaaattca aatatctgtg
     1741 cccttgaagg ttgacaaaag aagaatgcaa atacaacgga gaaaaacgta tcggagtgtc
     1801 ttgttttgaa tgcttcctct gtgctctcag ggtgaattca tgttgtaata tttaaaaatc
     1861 acaagatagg ttgttacact gttacactgt ggcattggaa ttgtaactca tcgggataac
     1921 caatgtgaga gggctatctg cagaggcaat cctgcggatt accttggttt acagttgcaa
     1981 acctacaaca gtcttttagg cttctcctag gactccagta actgactgct ttccgtggtg
     2041 ttgtggtact gttattactc gtatttgctg cctgtagaac aatcttcaaa ctgagccatg
     2101 ctcgagggaa gggaaaggaa ctacaattac ttctgttggt aatgtattag tcttcaaaaa
     2161 aaatccaaca gaaaggaaga gaaagctact gtatattaca gtaagaaaag ttgcatagtc
     2221 attttaaatt gaatggagat ataaatcgcc taatgtctac aagcactgtt acttgagagt
     2281 agcaggaata ttgttttaaa gtgtgtgcca cccagcttga aagttctttt gaaatgattg
     2341 gccaaacgaa cattagcagt ctcactgtta gttttgggcc tcctgtattt tactttttct
     2401 ttgattctaa atagttatgt ttaatctaaa aatatttatc aatactgatc aaatttgaga
     2461 attactttgt aatcctgcta agtgtatgta ttgtatatat attatatatt aaatatataa
     2521 tatattgagg ttataaaaga tgaaaatatt gaatccttat aatattttaa gttacagaat
     2581 gtccgttaaa caatgattga atgagatgta tttgtatcta gaaatttctg tttggaatga
     2641 gattaaaata catttttaaa agctcaa
//
