LOCUS       NM_001401895            3042 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 154 (Tmem154), mRNA.
ACCESSION   NM_001401895
VERSION     NM_001401895.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Dec 21, 2022 this sequence version replaced NM_001401895.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643289.6532.1,
                                           SRR26360186.1538994.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760434
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-96                JAXUCZ010000002.1  172313290-172313385
            97-348              JAXUCZ010000002.1  172333001-172333252
            349-387             JAXUCZ010000002.1  172333341-172333379
            388-415             JAXUCZ010000002.1  172338703-172338730
            416-501             JAXUCZ010000002.1  172339638-172339723
            502-559             JAXUCZ010000002.1  172341324-172341381
            560-3042            JAXUCZ010000002.1  172350457-172352939
FEATURES             Location/Qualifiers
     source          1..3042
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..3042
                     /gene="Tmem154"
                     /gene_synonym="RGD1563262"
                     /note="transmembrane protein 154"
                     /db_xref="GeneID:361972"
                     /db_xref="RGD:1563262"
     exon            1..96
                     /gene="Tmem154"
                     /gene_synonym="RGD1563262"
                     /inference="alignment:Splign:2.1.0"
     CDS             33..575
                     /gene="Tmem154"
                     /gene_synonym="RGD1563262"
                     /codon_start=1
                     /product="transmembrane protein 154 precursor"
                     /protein_id="NP_001388824.1"
                     /db_xref="GeneID:361972"
                     /db_xref="RGD:1563262"
                     /translation="MTVPCAALVLALGLALGHSSQGNDEDSEYSGHSTTEEDTAEEET
                     TRALATVTTEALAESANSTHIHGTSNQVEFILMVAVPLAALLILLFAILIVIYFKSRR
                     PKQEPSSQGSQSALQTHDLGGETLKVPIFEEDTPSVMEIEMEELDKWMNSMNRNANYE
                     CLPTLKEEKEPNLSPSDNES"
     exon            97..348
                     /gene="Tmem154"
                     /gene_synonym="RGD1563262"
                     /inference="alignment:Splign:2.1.0"
     exon            349..387
                     /gene="Tmem154"
                     /gene_synonym="RGD1563262"
                     /inference="alignment:Splign:2.1.0"
     exon            388..415
                     /gene="Tmem154"
                     /gene_synonym="RGD1563262"
                     /inference="alignment:Splign:2.1.0"
     exon            416..501
                     /gene="Tmem154"
                     /gene_synonym="RGD1563262"
                     /inference="alignment:Splign:2.1.0"
     exon            502..559
                     /gene="Tmem154"
                     /gene_synonym="RGD1563262"
                     /inference="alignment:Splign:2.1.0"
     exon            560..3042
                     /gene="Tmem154"
                     /gene_synonym="RGD1563262"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcagcatcct gagcgcgggc gagcctgctg acatgaccgt gccgtgcgct gccttggtct
       61 tggctctggg actcgcgcta ggtcattcaa gccagggaaa tgatgaggat tcagaatact
      121 caggacacag caccacagaa gaagacaccg cagaggaaga gacgacaagg gctttggcta
      181 cagtgaccac agaagcatta gctgaaagcg cgaattctac ccacatccac ggcacctcga
      241 atcaggtgga atttatatta atggtggctg tcccactggc tgcgctgctc atccttctgt
      301 ttgcgattct catcgtgatc tactttaaaa gcagaagacc caagcaggag ccttctagcc
      361 aaggatctca aagtgccttg cagacacatg atctaggagg cgagaccttg aaagtcccta
      421 tttttgaaga ggacacaccc tccgttatgg aaatagagat ggaggagctt gacaaatgga
      481 tgaacagcat gaacagaaat gccaactatg aatgtctgcc tactctgaag gaagaaaagg
      541 agccaaacct cagcccaagt gataatgaat cctaagtcca agtggcgttg acgtttccca
      601 agagcatact ccccgagggc acctgcaggg cccaccagag aaggatgaag aggagacaag
      661 tttaattaat ttcaaatcag tgtagacaca agaacctttt agtgtttctt ccaccatccc
      721 ctcttcagat gatggcatcc cctggacttg gaagaatgag gtactgaagt cttggaaagg
      781 cctggctgcc cgccagccca cgcatgatga agaaagagcc ctgtgtggtg ctggcttcgg
      841 acctgtgggt gtccctcccc actgcctcct cctcgctcat tctggtcacc ctaagatcac
      901 agctctggtc tgcttcattc tgagggtttg aatcaggaag ctggtcttct gggtccaggt
      961 cgccttactg cccaccaggt ttggatattt tctcactgtt catgtcctct caggtcaact
     1021 ctagtcatct ggaactttcc tcaaggacgg ttgggttaca gaaaacaggc caaacaaagc
     1081 aggcgtttca tagccacacc atcccaggga ctcgttaagc ttgtttctca cctgctaaga
     1141 aaacacaagg aagtccacag gcctcatggg agatccttgc acgactcgta gacttgcact
     1201 cagccacatc tcagtcactt ttgaaaactt ccagaagaaa cagcagtctt taaagagaga
     1261 agcaactttt cccttctccg ctaaagtcac ctctacttgc aacatctcaa agcagctgat
     1321 cttgtttcaa gccacaggcc tggcttgtgc tgtgcgcggg cttggagtgc aggcaggtgg
     1381 gggtcatggg agatcttcaa ggctgagcta gaaggacctg tgcctgtggc agctctggcc
     1441 catggtgctt tctggtctgt gtgctctaca tccagccttt tctgtagggc tgggaagagt
     1501 ctccaatgct tagccctcca ggaggtggct cccaggccat cagaaatgac attctacatg
     1561 aaattagttg acatccatgt actaaaaaca atggagttaa aaatgcagaa aaacccacta
     1621 acctctcctc cttagtaaag tcccatttaa tccttcgttt tctaattctg acctttaaaa
     1681 ggccatccag caaattgagt ctctggttct cgtgggatgc ttggtatttt attccaggaa
     1741 agaaacaaag aatgaaaatt ttattttgct aaccacatat aaactgaggg gagatgaggt
     1801 taaccaaact ttttgctgct gaattggggt tctgtatttg aaaggctgct ctcatgctcc
     1861 acagagagcc ttctcttgcc cccttggggc ctctttaatg agctcttgtc ttctgagata
     1921 tgcagataat tttatagaca gagccacagg ctagggtggt ctctctatgc agtaaatgac
     1981 ctgaatccag gctctcctac tgtcctggga ccgtgcagtt ctcagacaaa aggcagttca
     2041 acagtgtatc ctcaaaagat tcgttgtcct gtctcactct gtcatggacc ctgtggacac
     2101 tcacaatgaa tttataacct gccctgactc tcccagtcac ccgacagcag atggagcctt
     2161 ctgagtcacc actcgcctag tctgcccatg actgctactt taaatttggt tctctttctg
     2221 aaaagtctag ttccttcttt cttggggtgt ctaagatccc cgatgactac caggtttttg
     2281 accttgatcc accctgccca gtatcagact tcagaatttc tcagaagtgt atgaggtgtc
     2341 ggactgttac ttttgataaa ggcgtgtttt gtgagacgat aacacgattc tcattcagtg
     2401 catcaaataa cctggaagtc ccaaagaaac aaatttacca gcacgctgtt aagtttgcat
     2461 ctgagatccg cattggcttt tctaactgca cagagacttc ctgcagagct atatgagttc
     2521 tgactcatgc catcggcatg gcccaagcag tcaagttaag cctacgattc tattcttact
     2581 atacgatcag agcacagcat atgtatatgt caattccatg aattcttaaa acaaaaccat
     2641 ttattttttt tttacactat tgataggaga aaaaccctca gcagtttgcc ttagctggat
     2701 agctactcag aacaaaccag attttagaat aaagatggcc atggacttta tctccgatgg
     2761 tgagttgttg gcctagcatg cccagagctg ggtttgaccc tagcactgta taaactgggc
     2821 actgttgcag gaagatcatt cctacaggtt caggtttatc cgcagataca tagtgagttt
     2881 aaggtcaggt cagcctggaa taggtaagac tgtgactcca aaaaaaaagt ttttaagaca
     2941 catgctttga tgtatttttc tttaaagcaa ggtaggttga cggcgttgct tagctggact
     3001 tcttcagaaa cttgtttcaa taaacatgtt ttaaaaaatc ca
//
