LOCUS       XM_006231046            1383 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 138 (Tmem138),
            transcript variant X1, mRNA.
ACCESSION   XM_006231046
VERSION     XM_006231046.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006231046.3.
            
            On Jan 21, 2021 this sequence version replaced XM_006231046.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1383
                     /gene="Tmem138"
                     /note="transmembrane protein 138; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     ESTs, 6 long SRA reads, 6 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 187 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:361728"
                     /db_xref="RGD:735168"
     CDS             259..747
                     /gene="Tmem138"
                     /codon_start=1
                     /product="transmembrane protein 138 isoform X1"
                     /protein_id="XP_006231108.1"
                     /db_xref="GeneID:361728"
                     /db_xref="RGD:735168"
                     /translation="MLQTSNYSLVLSLQFLLLCYDLFVNSFSELLRMAPVIQLVLFII
                     QDIAILFNIIIIFLMFFNTFVFQAGLVNLLFHKFKGTIILTSVYLALSISLHVWVMNV
                     RWKDSSSFRWTNGLQTLFVFQRLAAVLYCYFYKRTAVRLGDPRFYQDSLWLRKEFMQV
                     RR"
ORIGIN      
        1 ggttctttga ggtgagtgta gatgatgcag atcgcagagt ggctggaagt cagaattttg
       61 tgttgctgtt gcttttgcta tgggtctttt tcccattccg gtgtgtgaac ggattggtac
      121 gggcccttgc attagagcca cggaaacagc tctgaattgg aaaaactctc cctgagttct
      181 gggcaggggg agaaccagaa gttattttct tcaggaccgt ggaatgtacc ccagggagtc
      241 ccaaaagtca gacagaagat gcttcagacc agtaactata gcctggtgct ctccctgcag
      301 tttctgttgc tgtgctatga cctgttcgtc aattccttct cggagctact acgaatggct
      361 cctgttatcc agctcgtgct gttcatcatc caggatattg caatcctctt caacatcatc
      421 ataattttcc tcatgttctt caacaccttc gtcttccagg ctggcctggt caacctcctg
      481 ttccataagt tcaaagggac catcattctg acgtctgtgt acctcgccct cagcatctcc
      541 ctgcatgtgt gggtcatgaa cgtgcgatgg aaagactcca gcagcttcag atggacaaac
      601 ggcctgcaga cactgtttgt attccagaga ctagccgcag tgctgtactg ctatttctac
      661 aaaaggacag ccgtgagatt gggtgacccc cgcttctacc aggactcact gtggctgcgc
      721 aaggagttca tgcaagtccg aaggtgacca cttcatctca cgttgatgag cacctttcct
      781 tcctgttaga aggcacctgg gctgctctcc agggaggggc aggctttggc agcaggaaac
      841 agatggactt cctggacaca tttgtgctag ctatgctcag cactcaagaa ggaagactca
      901 ccaggcatgg ttggaaacgg acaggaggat tgctgtgcgt ttgaggccac cctaggccta
      961 cctactgagt tctaggttag cctatagaga gagaccctac ctaaaaacaa caccaggagg
     1021 accttcccta ttgcaaatta aagtgttctc ccacagtacc aagtcagtgt tgcctcatcc
     1081 tcagtccacc cacttccttc tctactctgt accactcact gtctttccct cgtccttcct
     1141 gaggatctgc aagctggagt tcccactctt taaggctatg gttcagcctt taggtagcat
     1201 cgtctcagcc caggccctgt tcttctggtc ccatacttga gtgactggag gatgcagaca
     1261 atggtggcca tgtcctcctg actcaccaca ccttagttgt ttagatttta tatccaaagt
     1321 acttttttac agttctaaaa ggaaataaat tgaattcttt tcttaaataa atggtagagc
     1381 gtg
//
