LOCUS       NM_198777               1304 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus transmembrane protein 138 (Tmem138), mRNA.
ACCESSION   NM_198777 XM_342021
VERSION     NM_198777.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Lee,J.H., Silhavy,J.L., Lee,J.E., Al-Gazali,L., Thomas,S.,
            Davis,E.E., Bielas,S.L., Hill,K.J., Iannicelli,M., Brancati,F.,
            Gabriel,S.B., Russ,C., Logan,C.V., Sharif,S.M., Bennett,C.P.,
            Abe,M., Hildebrandt,F., Diplas,B.H., Attie-Bitach,T., Katsanis,N.,
            Rajab,A., Koul,R., Sztriha,L., Waters,E.R., Ferro-Novick,S.,
            Woods,C.G., Johnson,C.A., Valente,E.M., Zaki,M.S. and Gleeson,J.G.
  TITLE     Evolutionarily assembled cis-regulatory module at a human
            ciliopathy locus
  JOURNAL   Science 335 (6071), 966-969 (2012)
   PUBMED   22282472
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC061578.1 and BF282432.1.
            
            On Jan 13, 2007 this sequence version replaced NM_198777.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161808.1, FQ220672.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-288               BC061578.1         4-291
            289-369             BF282432.1         332-412
            370-1304            BC061578.1         300-1234
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1304
                     /gene="Tmem138"
                     /note="transmembrane protein 138"
                     /db_xref="GeneID:361728"
                     /db_xref="RGD:735168"
     exon            1..24
                     /gene="Tmem138"
                     /inference="alignment:Splign:2.1.0"
     exon            25..288
                     /gene="Tmem138"
                     /inference="alignment:Splign:2.1.0"
     CDS             161..649
                     /gene="Tmem138"
                     /codon_start=1
                     /product="transmembrane protein 138"
                     /protein_id="NP_942072.2"
                     /db_xref="GeneID:361728"
                     /db_xref="RGD:735168"
                     /translation="MLQTSNYSLVLSLQFLLLCYDLFVNSFSELLRMAPVIQLVLFII
                     QDIAILFNIIIIFLMFFNTFVFQAGLVNLLFHKFKGTIILTSVYLALSISLHVWVMNV
                     RWKDSSSFRWTNGLQTLFVFQRLAAVLYCYFYKRTAVRLGDPRFYQDSLWLRKEFMQV
                     RR"
     exon            289..460
                     /gene="Tmem138"
                     /inference="alignment:Splign:2.1.0"
     exon            461..536
                     /gene="Tmem138"
                     /inference="alignment:Splign:2.1.0"
     exon            537..1274
                     /gene="Tmem138"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacaaccgac atcggttctt tgaggccctt gcattagagc cacggaaaca gctctgaatt
       61 ggaaaaactc tccctgagtt ctgggcaggg ggagaaccag aagttatttt cttcaggacc
      121 gtggaatgta ccccagggag tcccaaaagt cagacagaag atgcttcaga ccagtaacta
      181 tagcctggtg ctctccctgc agtttctgtt gctgtgctat gacctgttcg tcaattcctt
      241 ctcggagcta ctacgaatgg ctcctgttat ccagctcgtg ctgttcatca tccaggatat
      301 tgcaatcctc ttcaacatca tcataatttt cctcatgttc ttcaacacct tcgtcttcca
      361 ggctggcctg gtcaacctcc tgttccataa gttcaaaggg accatcattc tgacgtctgt
      421 gtacctcgcc ctcagcatct ccctgcatgt gtgggtcatg aacgtgcgat ggaaagactc
      481 cagcagcttc agatggacaa acggcctgca gacactgttt gtattccaga gactagccgc
      541 agtgctgtac tgctatttct acaaaaggac agccgtgaga ttgggtgacc cccgcttcta
      601 ccaggactca ctgtggctgc gcaaggagtt catgcaagtc cgaaggtgac cacttcatct
      661 cacgttgatg agcacctttc cttcctgtta gaaggcacct gggctgctct ccagggaggg
      721 gcaggctttg gcagcaggaa acagatggac ttcctggaca catttgtgct agctatgctc
      781 agcactcaag aaggaagact caccaggcat ggttggaaac ggacaggagg attgctgtgc
      841 gtttgaggcc accctaggcc tacctactga gttctaggtt agcctataga gagagaccct
      901 acctaaaaac aacaccagga ggaccttccc tattgcaaat taaagtgttc tcccacagta
      961 ccaagtcagt gttgcctcat cctcagtcca cccacttcct tctctactct gtaccactca
     1021 ctgtctttcc ctcgtccttc ctgaggatct gcaagctgga gttcccactc tttaaggcta
     1081 tggttcagcc tttaggtagc atcgtctcag cccaggccct gttcttctgg tcccatactt
     1141 gagtgactgg aggatgcaga caatggtggc catgtcctcc tgactcacca caccttagtt
     1201 gtttagattt tatatccaaa gtactttttt acagttctaa aaggaaataa attgaattct
     1261 tttcttaaat aaataaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//
