LOCUS       XM_039105825            3171 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 135 (Tmem135),
            transcript variant X6, mRNA.
ACCESSION   XM_039105825
VERSION     XM_039105825.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3171
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3171
                     /gene="Tmem135"
                     /gene_synonym="PMP52; RGD1309948"
                     /note="transmembrane protein 135; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 40 ESTs, 4 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 14 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:293098"
                     /db_xref="RGD:1309948"
     CDS             322..1314
                     /gene="Tmem135"
                     /gene_synonym="PMP52; RGD1309948"
                     /codon_start=1
                     /product="transmembrane protein 135 isoform X3"
                     /protein_id="XP_038961753.1"
                     /db_xref="GeneID:293098"
                     /db_xref="RGD:1309948"
                     /translation="MANLATETLFRMGVARGTITTLRNGEVLLFCITAAMYMFFFRCK
                     DGLKGFTFSALRFIVGKEEIPTHSYSPETAYAKVEQKREKHRGTTRAMSLIALVRSLV
                     DSICKHGPRHRCCKHYEDNCISYCIKGFIRMFSVGYLIQCCLRIPSAFRHLFTEPSRL
                     LSLFYNKENFQLGAFLGSFVSIYKGTSCFLRWIRNLDDELHAIVAGFLAGVSMMFYKS
                     TTISMYLASKLVETMYFKGIEAGKVPYFPQADTIIYSISTAICFHAAVMEVQNLRPSY
                     WKFLLRLTKGRFALMNRKALDVFGTGASREFHNFIPRLDPRYTVVTPELPIDFS"
ORIGIN      
        1 ctgagagtgc aggcgttcac tactgtatcc agtttactgg gttctaggca tccagtgtca
       61 gctcaccatg cctgtgcgat cgcagctgtt ctccggaagc ggaagctgga atattacttg
      121 tacaagctgc ttcctgagat cctccagtct gcctccttcc tgactgctaa tggggccttg
      181 tacattactt tcttctgtgt tttaaggaag attcttggaa aattctactc atggactcct
      241 ggctttggtg ctgctctgcc agcctcctat gtggccattc taattgaaag gaaaagcagg
      301 agagggctgc tcacaattta tatggccaac ttggccacag aaacactatt tagaatgggt
      361 gttgcaagag gaaccatcac aacattaaga aatggagaag tccttttgtt ctgcatcaca
      421 gcggccatgt acatgttctt tttcaggtgc aaagatggct taaaaggctt tacgttttct
      481 gcgcttaggt ttattgtagg gaaggaagaa attcccacac actcttactc accggagaca
      541 gcatatgcaa aagtggagca gaagagggag aagcacaggg ggacgacgag agcgatgagt
      601 ctaattgctc tggttcgcag tctcgtggac tccatatgca agcatggacc acggcacaga
      661 tgctgcaagc attatgaaga caactgcatc tcctactgta ttaaaggctt catcaggatg
      721 ttcagcgtgg gttacttgat ccagtgctgt ctccggatcc cttctgcatt taggcatctg
      781 tttacagaac catcccggct cctctctctc ttctacaaca aagaaaactt ccagctgggt
      841 gcttttcttg gatcttttgt tagtatatac aagggcacaa gttgtttcct ccgctggatc
      901 aggaacctgg atgatgagct gcatgctatt gtggctgggt ttttggcagg tgtgtcgatg
      961 atgttttata aaagcacaac aatttccatg tacctagctt ccaagctggt ggagacaatg
     1021 tacttcaagg gcatcgaggc tggaaaggtt ccctatttcc ctcaagcaga tactatcatc
     1081 tactccatct ccacagcgat ttgtttccat gcagctgtta tggaagttca gaacttgcga
     1141 ccatcgtact ggaagttcct tttaaggctc accaagggca ggtttgcact catgaacaga
     1201 aaagccctgg atgtgtttgg tactggtgca tctagagaat ttcacaactt catccccaga
     1261 ctagacccac gatacacagt tgtcacacca gagctgccca tagacttttc ctgaagacga
     1321 ctgtaactta ttgactgtct caccattttc tcctgaagag ttaattatgt tcaacacaga
     1381 aggggcccaa gctgaacctc agtgttatgt caacgagaga tgctttttct ttctttccat
     1441 accaatcaga aatacagaag ctttttagaa aggcgttgct taataattaa gcttcctctg
     1501 tagccagaat ctcattctgg atcatgtagt gttgacaaca ttatgatata ttgttgatta
     1561 aattatgtcc acaaagaata ttgaataatc tatgtagaaa tataataaga agagtatact
     1621 taaaaattac tttaaaagat gtctttagtt cattccaata gaattcttgg tcaaaactaa
     1681 gaatatttct tcactttagg atttgcagag gatcacggat gtgtggattc tgtctgtgat
     1741 ttttatgctt ttgaatggat ttctgtagct gtggggtgtt ggatatgggg agaaacctct
     1801 gtgggcattg ctgctttact gtggagcaat gtggaggaag tggccattct tatttcaggg
     1861 atacaaacat gggtttcaga ccatttgggc caatgtcatg gtggtaccca tactcttgtg
     1921 cagctgacag tcctgtctgc cttcgtgacc agacgggctg ttgggcagcc tagtgacctt
     1981 acatgctagt agcaggttag gagcaaatgg aaactgatat gtgctgcagt aaggaatctc
     2041 tgtgtccaca ggagtgttac acttgaatat tgtcaagcag acaacttaga acccagcctt
     2101 tacaccgcag gcgtagtgcg tttatttcca ccacaatgac tgtgctctct gtagctcggc
     2161 gtgaatgcca ttgatgtttt agaaagggtt aatatcctat ggaacaaaag agctttgggc
     2221 cagtttgaca gttggtgccc tctctaatgc ctcccctaaa tgggatgttt tatgtctaaa
     2281 aatgtgaaaa cacagtgatt gttgggagtt cgtctctcgc taagtggatt cctgttcatt
     2341 gaccagttta ctctggagtt agggacaaca gacagttggt gctgattata gaagcagtcc
     2401 tggacagcta gctgtctgaa atatgatcac ttgggttttc tggggaaagt tgtacttttc
     2461 taagttaata tagaagtcta aagtggttgt gatgtctaca gttaatgtaa tatataggaa
     2521 ttatctttaa atatataatt ttgttgctaa aaaggtgtca ggccattgta agttatgcag
     2581 tagaccttgt gttaggacag gaattacaac ccagacatta aaaatactta atctcccata
     2641 ttcagttgca tcagcacttg tatttctatg taatcctatc cttggttgtt atggtaaatt
     2701 gaatccctac agagagacag actctagtgc catcatgtaa cagaaccact ttagtttggt
     2761 cagaattcac attgtaatta gcttctagcg tggacttacc tacttggtaa tactgttgaa
     2821 gggtcatttg gttttggact tcaacaccga ttaattaata cagttttagg ttgttattca
     2881 ctggaattga attgatgatt agtactgtgt ttacttttga aaatgaagta ttaaagcact
     2941 gagaacacct ggctacatgt acctcatttt ctcctctcag attttatgtc tgctgcattt
     3001 ttcttgtcag gttaaaaaaa aatctatttt aagccataag tcattctttt cattgacatt
     3061 aaaagactgt gataatgatt aatcctattg aaatgtactt aaaaaatgtt tagtaaaatc
     3121 ctgctggtca aaaagatgca tttctatgag agatatattt ttaacaaatt a
//
