LOCUS       NM_001414334            4355 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 132E (Tmem132e), mRNA.
ACCESSION   NM_001414334 XM_008767965
VERSION     NM_001414334.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4355)
  AUTHORS   Li,J., Zhao,X., Xin,Q., Shan,S., Jiang,B., Jin,Y., Yuan,H., Dai,P.,
            Xiao,R., Zhang,Q., Xiao,J., Shao,C., Gong,Y. and Liu,Q.
  TITLE     Whole-exome sequencing identifies a variant in TMEM132E causing
            autosomal-recessive nonsyndromic hearing loss DFNB99
  JOURNAL   Hum Mutat 36 (1), 98-105 (2015)
   PUBMED   25331638
REFERENCE   2  (bases 1 to 4355)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Nov 18, 2022 this sequence version replaced XM_008767965.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.62626.1,
                                           SRR21887623.2207906.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-196               JAXUCZ010000010.1  67828475-67828670
            197-1127            JAXUCZ010000010.1  67872320-67873250
            1128-1274           JAXUCZ010000010.1  67874999-67875145
            1275-1467           JAXUCZ010000010.1  67875393-67875585
            1468-1611           JAXUCZ010000010.1  67876326-67876469
            1612-1817           JAXUCZ010000010.1  67878511-67878716
            1818-2106           JAXUCZ010000010.1  67880493-67880781
            2107-2298           JAXUCZ010000010.1  67881470-67881661
            2299-4355           JAXUCZ010000010.1  67882342-67884398
FEATURES             Location/Qualifiers
     source          1..4355
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..4355
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /note="transmembrane protein 132E"
                     /db_xref="GeneID:287564"
                     /db_xref="RGD:1565522"
     exon            1..196
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..3351
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /codon_start=1
                     /product="transmembrane protein 132E precursor"
                     /protein_id="NP_001401263.1"
                     /db_xref="GeneID:287564"
                     /db_xref="RGD:1565522"
                     /translation="MAPGMLGRRGAALLCLSVLLAHAASRSHPASPSPPGPQASPVLP
                     VSYRLSHTRLAFFLKEARPPTPTAMNGSLQRSEPFVVFQTKELPVLNVSLGPFSTSQV
                     VARELLQPSSTLDIPERLTVNWKVRAFIVRARVPASQPVAQVLFYVAGRDWDDFGVTE
                     RLPCVRLHAFRDAREVRSSCRLGGALATCLVRAELPLAWFGPPAPAAPPSTRRKSPDG
                     LEPEATAESQQVELYYTLHAPDAAGGCGSARRGSGPGPAARAESPTQHPLLRIGSISL
                     FRPPPRRAMQEHRLDSNLMIRLPDRPLRPGEVLSILLYLAPNSSSAASPSLEHFTLRV
                     KAKKGVTLLGTKSRNGQWHVTSELLTGAKHSTATVDVAWAQGTPLPPWESQGPLEILQ
                     LDFEMENFTSQSVKRRIMWHIDYRGHSALPDLERAVTELTVIQRDVQAILPLAMDTEI
                     INTAILTGRTVAIPVKVIAIEVTGVVLDVSDLVECQSHREDIIKVSSSCDYVFVSGKE
                     SRGSMNARVTFRYDVLSAPLEMTVWVPKLPLHIELSDARLSQVKGWRVPILPDRRSAR
                     ESEDEEEEEEERRQSANRGCTLQYQHATLQVFTQFHTTSSEGTEQVVTMLGPDWLVEV
                     TDLVSDFMRVGDPRVAHLVDSNTLAGLEPGTTPFKVVSPLTEAVLGETLLTVTEEKVS
                     ITQLQAQVVASLTLSLRPSPGSSHTILATTAAQPTLSSVKQEALLSLWLSYSDGTTAP
                     LSLYSPRDYGLLVNSLDERVATVTQDKAFPLLVAEAEGAGDLLRAELTISESCQKTKR
                     KSVLATTPVGLRVHFGRDEEDPTYDYPGPSQPGPGGGEDEARGAGPPGTAIPAGEVPG
                     LGTAGPMPPTEDFLPLPTGFLQMPRGLTDLEIGMYALLGVFCLAILVFLINCIVFVLR
                     YRHKRIPPEGQTSMDHSHHWVFLGNGQPLRVQGELSPPAGSALETVPACCHGDHHSSG
                     SSQTSVQSQVHGRGDGSSGGSARDQTEDPASSPTSKRKRVKFTTFTTLPSEELAYDSV
                     PAGEEDEEDEEDLGWGCPDVAGTTRPTPPPDLHNYMRRIKDIA"
     exon            197..1127
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /inference="alignment:Splign:2.1.0"
     exon            1128..1274
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /inference="alignment:Splign:2.1.0"
     exon            1275..1467
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /inference="alignment:Splign:2.1.0"
     exon            1468..1611
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /inference="alignment:Splign:2.1.0"
     exon            1612..1817
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /inference="alignment:Splign:2.1.0"
     exon            1818..2106
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /inference="alignment:Splign:2.1.0"
     exon            2107..2298
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /inference="alignment:Splign:2.1.0"
     exon            2299..4355
                     /gene="Tmem132e"
                     /gene_synonym="RGD1565522"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctttctggc ccccgaagcc taaacagaca cagctgggcg ccagtgagtt ggaggcgacc
       61 gtgtccagcc tgagaccaat tggccctgga cctctgcccc ctcggacctc tcctgccccc
      121 gcctcggcca tggccccagg gatgttgggc cgccgcggcg ccgccctact ctgcctctcc
      181 gtgctgctcg cccacgccgc cagccgctct catccggcca gccccagccc tcctggacct
      241 caggctagcc ctgtactacc agtcagctac cgcctgtcgc acactcgact ggccttcttc
      301 ctaaaggaag cgcggccgcc gacacccacg gcgatgaacg gctccctgca gcgctcggag
      361 cccttcgtgg tgttccaaac caaggagttg ccggtcctca acgtgtccct ggggcccttc
      421 agcaccagcc aggtggtagc gcgggagctt ctgcagccgt ccagcaccct agacatcccc
      481 gagcgcttga cggtcaactg gaaagtgcgc gccttcatcg tgcgcgcccg cgtgcccgcc
      541 tcgcagcccg tagcacaggt gctcttctat gtggctggcc gcgactggga cgactttggg
      601 gtcactgagc ggctgccctg tgtccgcctg cacgccttcc gcgacgcacg cgaggtgcgg
      661 agctcttgtc gcctgggcgg ggctttggcc acctgcttgg tgcgcgcgga gctgcccctg
      721 gcctggttcg gacccccagc ccctgccgcg ccgcccagca cccgccgcaa gtcccccgac
      781 ggactggagc cggaggcgac agcggagagc cagcaggttg agctctacta cacgctgcac
      841 gcccccgatg cagcgggcgg ctgcgggagc gcgcggcgcg gctccgggcc cggaccagcc
      901 gcgcgcgccg aaagccccac gcagcacccg ctgctgcgca tcggcagcat cagtctgttc
      961 cggccgccgc cgcgcagggc catgcaggag cacaggctag acagcaacct gatgatccgc
     1021 ctgcctgacc ggccactcag gcctggagag gtactcagca tcctccttta cctggcaccc
     1081 aactcctctt cagctgccag ccccagcttg gaacacttca cacttagggt gaaagccaag
     1141 aagggtgtga ctctcttagg caccaagtcc cgaaatggcc agtggcatgt gacttcagag
     1201 ctgctgacgg gggcaaagca ttcaacagcc actgtggatg tggcctgggc ccagggcaca
     1261 cctttacccc cctgggagag ccagggaccc ctggagatcc tgcagctgga ctttgagatg
     1321 gagaacttca ccagccagtc agtgaagcgg aggatcatgt ggcacattga ttaccgaggc
     1381 cacagtgccc tgcccgacct ggagcgggct gtcactgagc tgacggtcat ccaaagggat
     1441 gtccaagcca tcctgcctct agccatggac acagagatca tcaacactgc catcctgacg
     1501 gggcggactg tagccattcc cgttaaagtc attgctatcg aggtgactgg tgttgtcctg
     1561 gatgtttctg acctcgtgga gtgccagtct cacagagagg acatcatcaa ggtgtccagc
     1621 agctgtgact atgtgtttgt aagcgggaag gagtctcgag ggtccatgaa cgccagagtc
     1681 accttccgct atgatgtcct cagtgccccc ctggaaatga cagtctgggt ccccaagcta
     1741 cctctgcaca tcgagctctc agatgctcgc ctcagccaag tgaagggatg gagggtgcct
     1801 atccttcccg acagaaggtc agctcgagag agcgaagatg aggaggaaga ggaagaggag
     1861 cgaagacaga gtgccaacag aggctgcact ttgcaatacc agcatgccac cctgcaggtc
     1921 ttcacccagt ttcatacgac atcctctgag ggcaccgagc aggtggtcac catgttgggc
     1981 cccgactggc tggtggaggt cactgacctg gttagtgact tcatgcgggt gggtgacccc
     2041 cgagtggccc acctggtgga cagcaacacg ctagcaggac tggagccagg caccacaccc
     2101 tttaaggtgg tatcccccct gactgaggct gtattggggg agacattgct gacagtgacg
     2161 gaggagaagg tcagtatcac acagctgcag gcccaggtgg tagccagtct caccttatcc
     2221 cttcgaccca gccctgggag cagccacacc atcctggcca ccacagctgc acagcccacc
     2281 ctcagctctg tcaagcagga agccctgctg agtctgtggc tctcctacag tgatggaacc
     2341 acagccccac tctctctata cagtccccga gactatggac ttctggtgaa cagcctggat
     2401 gagcgggtgg ccaccgtgac ccaggacaag gctttcccac tgctagtggc tgaggcagag
     2461 ggggcaggag atctgctccg tgcggagctc accatctcgg agagttgcca gaaaaccaag
     2521 cgcaagagtg tgctggctac tactcctgtg ggcctgcgcg tacactttgg gcgggacgag
     2581 gaggacccca catatgacta cccagggccc agccaacccg ggcctggtgg gggcgaggat
     2641 gaagcccgcg gagctggtcc accaggcact gccattccgg ctggtgaggt ccctggattg
     2701 ggtactgccg gccccatgcc acccacagaa gacttcttgc cgctgcccac cggcttcttg
     2761 caaatgcccc gggggctgac ggacctagag attggtatgt atgccttgct gggggtcttc
     2821 tgcctcgcca tccttgtctt cctcatcaac tgcattgtgt tcgtgctgcg ataccggcac
     2881 aagcgcatcc ctcccgaggg ccagaccagt atggaccatt ctcaccactg ggtgttcctg
     2941 ggcaatgggc agccactgcg ggtgcaaggt gaactgtcgc cacctgcagg gagcgcgctg
     3001 gaaaccgtgc ctgcctgctg ccatggtgat caccacagca gcggcagttc ccagaccagc
     3061 gtccagagcc aggtgcacgg ccgtggggac ggctcctctg ggggctcagc cagggaccag
     3121 acggaggacc ctgctagctc gcccacctct aaacgcaaga gggtcaagtt cacgaccttt
     3181 accactctgc cctcggaaga gctggcctat gactcagtgc ctgctggtga agaggatgag
     3241 gaggatgaag aggacttggg ttggggttgt ccagatgtgg ccggaaccac aaggcccact
     3301 ccgcccccgg acctgcacaa ttacatgcgc agaatcaaag acattgcata atggtgactt
     3361 ggggtggtgg gataacccac acatacgtgg tagcctctgc tgggactcag cctggaccca
     3421 cccggctcac agggacttgg ggcagctgaa tggatgttat agtccctgcc actgcagctt
     3481 tgatctggct ggttgcagcc agatccactt tgaccttctg ccccttacag gtggaaggct
     3541 ccttctaaac ccggcgtgaa gcagggagac cgttcagccc cgttcaccct ttccaacctc
     3601 attccttctt agacatcccc actgccccaa gattgtggca ccattggcca aacttggggc
     3661 caggtgggcc cacactgtgc cctgctatgc ctcccatgtc cccaattggt gccccctgtg
     3721 caggggaccc gagtggggtc ttgtgtcaca ggctgcacaa agacttttct taagtcagta
     3781 ttcagggatt tctgtcctgc agggtgggaa gtggtggctg cctgccttgc cgaggatctt
     3841 gctgcagaca gaacatttga gtgttggggg acagttgtga tgtctgctgg tttctgggca
     3901 tctcccaagc atggagctga ctgcagaggg tccagtctga agtgggcact tttctgtggc
     3961 ttccactgct tctttgactt ggggagggct caagaaggag gggctttcat ttttctctgg
     4021 ccaaacccca cccacacagt aagcgcaggg acagcctgtc cccacagcaa gatcaacact
     4081 accgcgcctt agcctgggct ctgctcactc ctgcttccct ccacaccaaa gggcaggcaa
     4141 ccacagccag catccctgag gcggaggggc ccgaccggga gtattgcaag ggcccatggg
     4201 gtgggtgaag gcagaaggaa gctattgctc aagcgccttg cccatttccc cagccacacc
     4261 tcttgggttc tacccaccac tgtgtcagtt tttcataaat aaatggaagg cattggcctg
     4321 ggttggggac agcagctccc tgcaaacaga cggta
//
