LOCUS       NM_001011557             723 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 126A (Tmem126a), mRNA.
ACCESSION   NM_001011557 XM_214998
VERSION     NM_001011557.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Hanein,S., Perrault,I., Roche,O., Gerber,S., Khadom,N., Rio,M.,
            Boddaert,N., Jean-Pierre,M., Brahimi,N., Serre,V., Chretien,D.,
            Delphin,N., Fares-Taie,L., Lachheb,S., Rotig,A., Meire,F.,
            Munnich,A., Dufier,J.L., Kaplan,J. and Rozet,J.M.
  TITLE     TMEM126A, encoding a mitochondrial protein, is mutated in
            autosomal-recessive nonsyndromic optic atrophy
  JOURNAL   Am J Hum Genet 84 (4), 493-498 (2009)
   PUBMED   19327736
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Mar 2, 2021 this sequence version replaced NM_001011557.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB322324.1, FQ231598.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMN11044071 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-85                JAXUCZ010000001.1  153843095-153843179 c
            86-181              JAXUCZ010000001.1  153841252-153841347 c
            182-375             JAXUCZ010000001.1  153838815-153839008 c
            376-490             JAXUCZ010000001.1  153837796-153837910 c
            491-723             JAXUCZ010000001.1  153837015-153837247 c
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..723
                     /gene="Tmem126a"
                     /gene_synonym="RGD1305677"
                     /note="transmembrane protein 126A"
                     /db_xref="GeneID:293113"
                     /db_xref="RGD:1305677"
     exon            1..85
                     /gene="Tmem126a"
                     /gene_synonym="RGD1305677"
                     /inference="alignment:Splign:2.1.0"
     exon            86..181
                     /gene="Tmem126a"
                     /gene_synonym="RGD1305677"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..683
                     /gene="Tmem126a"
                     /gene_synonym="RGD1305677"
                     /codon_start=1
                     /product="transmembrane protein 126A"
                     /protein_id="NP_001011557.1"
                     /db_xref="GeneID:293113"
                     /db_xref="RGD:1305677"
                     /translation="MESHKPSTNKDDLIFNIIPRKIKQLPESDRNLLEYGSAYIGLNA
                     AFGGLIANSLFRRILNVTQARVASSLPMAVIPFLTANLSYHSFVSLPLSTGNLNCEIC
                     TTTRGTLVGFVLGGLYPILLAIPVNGGLAARYESSPLPQRGNIFNYWITISKPVFRKM
                     LFPTLLQTAFAAYLGSRQYKLLIKALQLPEPDLEIQ"
     exon            182..375
                     /gene="Tmem126a"
                     /gene_synonym="RGD1305677"
                     /inference="alignment:Splign:2.1.0"
     exon            376..490
                     /gene="Tmem126a"
                     /gene_synonym="RGD1305677"
                     /inference="alignment:Splign:2.1.0"
     exon            491..723
                     /gene="Tmem126a"
                     /gene_synonym="RGD1305677"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agatggagcc caagcaaccc tagcgaaggt tgtggtagat tcgggcgcgg gaggcggcca
       61 taagctgccg tcattctgcc gagtggtcca agatggaaag tcataaacca agtactaaca
      121 aagatgattt aatatttaat atcataccca gaaaaatcaa acaacttcca gaatcagaca
      181 ggaatctgct tgaatatgga tcagcatata ttggacttaa tgctgctttt gggggcctaa
      241 tagcaaacag tctatttcgg cgaattttga acgtgacaca agctcgagta gcatctagct
      301 tgccaatggc tgtgatccca tttttgacag caaacctgtc ctaccatagt tttgtaagtt
      361 tacctttgag tacaggtaat ttgaactgtg aaatctgtac gacaacacgg ggtacactag
      421 ttggttttgt tctgggtggt ctgtacccca tccttttggc tatacccgtg aatgggggcc
      481 ttgctgccag gtatgaatca agtcctctac cacagagggg aaacatcttc aattactgga
      541 ttactatttc taagcctgtc tttagaaaaa tgttatttcc tactttactt cagactgctt
      601 ttgcagcata tcttgggtct agacaatata aactcctcat aaaggccctt cagttacctg
      661 aacctgattt agaaattcaa tgatttgaag caaacatgta caaaaataaa atgttgaaaa
      721 tta
//
