LOCUS       NM_001010945            1562 bp    mRNA    linear   ROD 16-FEB-2025
DEFINITION  Rattus norvegicus transmembrane protein 120A (Tmem120a), mRNA.
ACCESSION   NM_001010945 XM_213742
VERSION     NM_001010945.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Batrakou,D.G., de Las Heras,J.I., Czapiewski,R., Mouras,R. and
            Schirmer,E.C.
  TITLE     TMEM120A and B: Nuclear Envelope Transmembrane Proteins Important
            for Adipocyte Differentiation
  JOURNAL   PLoS One 10 (5), e0127712 (2015)
   PUBMED   26024229
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Mar 15, 2021 this sequence version replaced NM_001010945.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089063.1, SRR22582424.1098097.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-400               JAXUCZ010000012.1  26578859-26579258
            401-519             JAXUCZ010000012.1  26580934-26581052
            520-636             JAXUCZ010000012.1  26581237-26581353
            637-696             JAXUCZ010000012.1  26585702-26585761
            697-792             JAXUCZ010000012.1  26585960-26586055
            793-882             JAXUCZ010000012.1  26586142-26586231
            883-948             JAXUCZ010000012.1  26586327-26586392
            949-1010            JAXUCZ010000012.1  26586488-26586549
            1011-1103           JAXUCZ010000012.1  26586640-26586732
            1104-1168           JAXUCZ010000012.1  26586882-26586946
            1169-1237           JAXUCZ010000012.1  26587048-26587116
            1238-1562           JAXUCZ010000012.1  26587200-26587524
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q12"
     gene            1..1562
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /note="transmembrane protein 120A"
                     /db_xref="GeneID:288591"
                     /db_xref="RGD:1311474"
     exon            1..400
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     CDS             320..1351
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /note="transmembrane protein induced by tumor necrosis
                     factor alpha; ion channel TACAN"
                     /codon_start=1
                     /product="transmembrane protein 120A"
                     /protein_id="NP_001010945.1"
                     /db_xref="GeneID:288591"
                     /db_xref="RGD:1311474"
                     /translation="MQSPPPDPLGDCLRNWEDLQQDFQGIQETHRLYRVKLEELTKLQ
                     DNCTNSITRQKKRLQELALVLKKCRPSLPSESLEAAQELESQIKERQGLFFDMEAYLP
                     KKNGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILIVISFTCRFLLNSRVT
                     DAAFNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTWPDGLMYQK
                     FRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLL
                     PFLFFGHFWQLFNALTLFNLARDPECKEWQVLMCGLPFLLLFLGNFFTTLRVVHQKFH
                     SQQHGSKKD"
     exon            401..519
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     exon            520..636
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     exon            637..696
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     exon            697..792
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     exon            793..882
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     exon            883..948
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1010
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     exon            1011..1103
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     exon            1104..1168
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     exon            1169..1237
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
     exon            1238..1562
                     /gene="Tmem120a"
                     /gene_synonym="RGD1311474; Tmpit"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cacgtgtcgc cttggtttgt gaatggtccg aggaagccga ctttgctggt aaaatgctgg
       61 acgcctaaat ctgttctcgg ttccaggaga cgccctgcag gcccgtggcc ccgcccagct
      121 cctgtccctg gctccgattg gctgccccta ggggcggggc tcgcgcgcag attacgccgg
      181 gccttttccc gttggcagtc gcggcggcgc gagcccggaa gcggacgggg gcggtggcgg
      241 aggctcctcc ggccggccgg ggttgcagct ccgtcctcca cactcgcggc tccccgcggc
      301 ctgtggcgtg gacaaagaca tgcagtcccc gcccccggac ccgctgggcg actgcctgcg
      361 caactgggag gatctgcagc aggacttcca aggtatccag gaaacacatc gcctgtaccg
      421 tgtcaagcta gaggagctga ccaaactcca ggacaactgt acaaactcta tcacacgcca
      481 gaagaagcgg ctccaggagc tggccttggt gctgaaaaaa tgcagaccct ctctcccatc
      541 cgagtccctg gaggctgccc aggagctgga aagccagata aaagagcgcc aaggcctctt
      601 ctttgacatg gaagcctatc tgcctaagaa gaacgggttg tacctgagtc tggttctggg
      661 gaatgtcaac gtgacacttt tgagcaagca ggctaagttt gcttacaaag acgagtatga
      721 gaaattcaag ctctacctca ccatcatcct cattgtcatc tccttcacct gccgcttcct
      781 gctcaactcc agggtgacag acgctgcctt caacttcctg ctggtctggt attactgcac
      841 gctgaccatc cgggagagca tcctcatcaa taatggttcc aggatcaaag gctggtgggt
      901 tttccatcat tatgtgtcca cattcttgtc aggagtcatg ctgacctggc cagatggact
      961 catgtaccag aagttccgga accagttcct gtctttctcc atgtaccaga gttttgtgca
     1021 gtttctgcag tattactacc agagcgggtg cctttaccgc ctgcgagccc tgggcgaacg
     1081 acacaccatg gacctcactg tggagggctt tcagtcttgg atgtggagag gcctcacctt
     1141 cctgcttccg ttcctcttct ttggacattt ctggcagctt tttaatgcgc tgacattgtt
     1201 taacttggcc cgggaccctg agtgcaagga gtggcaggtg ctcatgtgcg gcctcccctt
     1261 cctcctcctc ttcctcggca attttttcac caccctccga gtggtgcatc agaagttcca
     1321 cagccagcaa cacgggagca agaaggatta agctagatct gataccagcc ccaaaggggc
     1381 ttctgacctg tgtgccaggt ggggcggcag gttggggatc cccttgtgtg tagggggttc
     1441 ccttctgtgc cccctgggct tcgtgggctc tgtgggccct gaggaaggcc tgggcctgga
     1501 gcccagcttg caggatttgg gctctaggcc tcaataaagg aagagaggcg tggagatacc
     1561 ga
//
