LOCUS       NM_001108779            2189 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 115 (Tmem115), mRNA.
ACCESSION   NM_001108779 XM_001074283 XM_343473
VERSION     NM_001108779.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ong,Y.S., Tran,T.H., Gounko,N.V. and Hong,W.
  TITLE     TMEM115 is an integral membrane protein of the Golgi complex
            involved in retrograde transport
  JOURNAL   J Cell Sci 127 (Pt 13), 2825-2839 (2014)
   PUBMED   24806965
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Chen,X.D. and Lin,J.H.
  TITLE     [The initial mechanism's investigation of pilose antler
            polypeptides resisting replicative senescence of rat chondrocyte]
  JOURNAL   Zhongguo Gu Shang 21 (8), 617-620 (2008)
   PUBMED   19108381
REFERENCE   3  (bases 1 to 2189)
  AUTHORS   Ivanova,A.V., Vortmeyer,A., Ivanov,S.V., Nickerson,M.L., Maher,E.R.
            and Lerman,M.I.
  TITLE     Loss of PL6 protein expression in renal clear cell carcinomas and
            other VHL-deficient tumours
  JOURNAL   J Pathol 214 (1), 46-57 (2008)
   PUBMED   17973242
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001108779.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643296.22878.1,
                                           SRR26643284.11731.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1384              JAXUCZ010000008.1  117086106-117087489
            1385-2189           JAXUCZ010000008.1  117090166-117090970
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..2189
                     /gene="Tmem115"
                     /gene_synonym="RGD1310540"
                     /note="transmembrane protein 115"
                     /db_xref="GeneID:363136"
                     /db_xref="RGD:1310540"
     exon            1..1384
                     /gene="Tmem115"
                     /gene_synonym="RGD1310540"
                     /inference="alignment:Splign:2.1.0"
     CDS             534..1586
                     /gene="Tmem115"
                     /gene_synonym="RGD1310540"
                     /codon_start=1
                     /product="transmembrane protein 115"
                     /protein_id="NP_001102249.1"
                     /db_xref="GeneID:363136"
                     /db_xref="RGD:1310540"
                     /translation="MQRALPGARQHLGAILASASVVVKALCAVVLFLYLLSFAVDTGC
                     LAVTPGYLFPPNFWIWTLATHGLMEQHVWDVAISLATVVVAGRLLEPLWGALELLIFF
                     SVVNVSVGLLGAFAYLLTYMASFNLVYLFTIRIHGALGFLGGVLVALKQTMGDCVVLR
                     VPQVRVSVVPMLLLALLLLLRLATLLQSPALASYGFGLLSSWVYLRFYQRHSRGRGDM
                     ADHFAFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRYDVGAPSSITISLPGTD
                     PQDAERRRQLALKALNERLKRVEDQSAWPSMDDDEEEAGAKTDSPLPSEQASTPPGKG
                     TAPESTLITFEAAPLL"
     exon            1385..2189
                     /gene="Tmem115"
                     /gene_synonym="RGD1310540"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcggctagg tctcaaggac tccgtatccc agcatgccga ggagccggaa ggcaagagct
       61 cagagggcgt acagtcgcgg ccgccggcgg gggcgcgcag gcgcggcgcc cctgtttgtc
      121 cgccccggag aggggaggag gtaccgtcaa gtcaaaacct tagcccagcc ggagctaaac
      181 gggcttgact tgaactggaa caaggcatca gtcccggcag atcgcagagt ctcagagtgg
      241 atggaggaag cccagccttg agatcaacgc tagcctggcc gctgggccga cggaaccggc
      301 agacaggcgt gcccaagcca cccagggcct aacgtcaggt ccccggcaag aaggctttct
      361 cctcgctttg gaactacagc cggatcagac cggaaccaga gccgtcacac ggaacagaag
      421 ccagtgaagt agccgggccc gggcctcccg tcggggccga actgggacga ggccccgggg
      481 aggcccctag gccaccttcc tcaccttccc tcaagccaac gcccgccagg aagatgcaac
      541 gcgccctgcc cggtgcccgc cagcatctgg gggccatcct ggccagcgcc agcgtggtag
      601 tgaaggcact gtgcgctgtg gtactatttc tctatctgct ttccttcgct gtggacacgg
      661 gctgcctggc cgtcacccca ggctaccttt ttccacccaa cttctggatc tggaccctgg
      721 ccacccatgg gctcatggaa cagcacgtgt gggacgtggc cattagtctg gccacagtag
      781 ttgtggccgg acgattactg gagcccctct ggggagcctt ggagctgctc atcttcttct
      841 cggtggtgaa tgtgtcagtg gggcttctgg gggccttcgc ctacctcctc acctacatgg
      901 cttccttcaa cttggtctac ctgttcacta ttcgtatcca cggcgccctg ggcttcttag
      961 gtggtgtcct ggtagcgctc aagcaaacta tgggagactg tgtggttctg cgagtgcccc
     1021 aggtccgcgt cagcgtagtt cccatgctat tgctggcgtt gctgctactc ctccggttgg
     1081 ccacactgct ccagagcccg gcattggctt cctacggctt tgggctgcta tcaagttggg
     1141 tgtatcttcg cttctatcag cggcacagcc gaggccgagg ggacatggct gatcattttg
     1201 cttttgccac cttcttccct gagatcctgc aaccggtagt gggactgcta gcgaacttgg
     1261 tgcatggcct cctggtgaag gtgaagattt gtcagaagac agtgaagcgc tacgatgtcg
     1321 gagcaccatc gtccatcact atcagcctcc caggcacaga ccctcaagat gcggagcgga
     1381 gaaggcaact ggccctgaag gctctcaatg agcggctgaa gagagtggag gatcagtcag
     1441 cctggcccag catggatgat gacgaagagg aggctggggc aaaaacggac agtcctctgc
     1501 cctcagaaca agcctccaca cccccgggga aggggactgc cccagaatcc actctcatca
     1561 ccttcgaggc agctcccctc ctctaaatca ctctgagtgc agttcttcta ctcccatgcc
     1621 gtccctgatc cgtctcagct actgcagagc acttactgct ctgaggagag gggagagggt
     1681 ctgctggggg ttcctgtggc cttctgctgt gtctcgacaa cactacacag gacccttgtt
     1741 gctacctggt tctgactcca gacaaccaca atgccaggta tggggcctct gagcgtcagc
     1801 cgtccagacc ccatttgcag taagattgta cctcagcagg tacaattcct caccaaggaa
     1861 gtggctgcag ggacactggt gccacagctc ctgggccagc ccttatgtct gaaactggtt
     1921 gccaacagcg ctgagccaag gcaaggattt gtatttgcca aaaacattct ggggacccag
     1981 ccagtgtggg tctgcacatc cctacccacc cccagactgc attcatatca gggtttcttg
     2041 tgcccttctg ctgtggcagt gacgaccgtg cctagccggg gctgccacag ttcccaggta
     2101 ttttctacag gaccacccaa gcgggcagca agcccagctt cacagtatca ataaagcggt
     2161 tctttgaggt gtggctcctg gactctgtc
//
