LOCUS       XM_039086902            1145 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 107 (Tmem107),
            transcript variant X9, mRNA.
ACCESSION   XM_039086902
VERSION     XM_039086902.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039086902.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1145
                     /gene="Tmem107"
                     /note="transmembrane protein 107; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 1 long SRA read, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 78 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:691750"
                     /db_xref="RGD:1595972"
     CDS             281..652
                     /gene="Tmem107"
                     /codon_start=1
                     /product="transmembrane protein 107 isoform X9"
                     /protein_id="XP_038942830.1"
                     /db_xref="GeneID:691750"
                     /db_xref="RGD:1595972"
                     /translation="MGRISGLVPSRFLTLLAHLESNIQACLPLKFTPEEYEKQDNQLV
                     AALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYCA
                     FPAVTETALFIAVFGLKKKPF"
ORIGIN      
        1 ggttacgggt gcatcctccc ggattcatcc cacaagcacc aggaggtgag catcggctcg
       61 ggtacctggc ctatagacat ctgcagaggg cgcagcacta tcgcgagact tccggaggca
      121 gctgcatggc gcctgaggac gcagttacca tggcaaccgg gcggcgcctg agcacgcggg
      181 aaggaggctt aagtagagag gtctggcctg cttgctctgg gagacttgat gagtgaccct
      241 cctcagactt ctacggcctc cgctttgggc ccccgaggcc atgggtcgga tctccgggct
      301 cgtgccctct cgattcctga cgctcttggc tcatctggaa agcaacatcc aggcttgcct
      361 gcctctcaag ttcaccccgg aggaatatga gaagcaggac aaccaactgg tagcagcgct
      421 ctgcctcacc ctgggcctct ttgcagtgga gctggctggc ttcctctcag gagtctccat
      481 gtttaatagc acccagagcc tcctctccat tgcagcccac tgtagcgcgt ctgtggccct
      541 atctttcttc atattcgagc gatgggaatg taccacgtac tgcgcttttc cagctgtcac
      601 tgaaactgcg ttattcatcg ctgtctttgg gctgaaaaag aaacccttct gatcacaatc
      661 cgatgaagag accaaagccg gaaacgtgat gaactccctc ccattgctgg aagaagaaag
      721 ggagaggctt cagttttctc tcgccctagt cttttgctcc tcccaactgc gtctaaacag
      781 aaaatggcaa tgttgggata agatctcaca aatcttgggt tataatttta ttagagtttt
      841 gtaataaaat tcattttata ataagagcaa ggcttagact atttgtcaga agaccattgg
      901 gtaaatcaaa aggctgatgt aaataaaggc ttttttctag ccttctgtac gtgagctagt
      961 agcttatgct tctatttgga tttttacggt acaaaatagg cggaagtgag tgggcgggaa
     1021 tatgtaaata agaacctcac atagggcttc taatttgctg tatgtgagcg gagcattatg
     1081 ggagaacttt gtttctctct ttctgcgccg aatggaaaaa taaaatattt caggcgactt
     1141 gcaaa
//
