LOCUS       NM_001398846            1943 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus transmembrane protein 102 (Tmem102), mRNA.
ACCESSION   NM_001398846 XM_008767901
VERSION     NM_001398846.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Chiang,Y.J., Ho,K.C., Sun,C.T., Chiu,J.J., Lee,F.J., Liao,F.,
            Yang-Yen,H.F. and Yen,J.J.
  TITLE     CBAP functions as a novel component in chemokine-induced
            ZAP70-mediated T-cell adhesion and migration
  JOURNAL   PLoS One 8 (4), e61761 (2013)
   PUBMED   23620790
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Kao,C.J., Chiang,Y.J., Chen,P.H., Lin,K.R., Hwang,P.I.,
            Yang-Yen,H.F. and Yen,J.J.
  TITLE     CBAP interacts with the un-liganded common beta-subunit of the
            GM-CSF/IL-3/IL-5 receptor and induces apoptosis via mitochondrial
            dysfunction
  JOURNAL   Oncogene 27 (10), 1397-1403 (2008)
   PUBMED   17828305
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Dec 27, 2021 this sequence version replaced XM_008767901.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582419.2154036.1,
                                           SRR22582416.269559.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676811 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-610               JAXUCZ010000010.1  55024059-55024668   c
            611-1943            JAXUCZ010000010.1  55022625-55023957   c
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..1943
                     /gene="Tmem102"
                     /gene_synonym="RGD1559450"
                     /note="transmembrane protein 102"
                     /db_xref="GeneID:497937"
                     /db_xref="RGD:1559450"
     exon            1..610
                     /gene="Tmem102"
                     /gene_synonym="RGD1559450"
                     /inference="alignment:Splign:2.1.0"
     CDS             397..1923
                     /gene="Tmem102"
                     /gene_synonym="RGD1559450"
                     /codon_start=1
                     /product="transmembrane protein 102"
                     /protein_id="NP_001385775.1"
                     /db_xref="GeneID:497937"
                     /db_xref="RGD:1559450"
                     /translation="MASTVWGGAPWWGPPPPAPARPLTDIDFCSGAQLQELTQLIQEL
                     GVQESWSEGPEPGADLLRAKEFVFSLLGLVHRQDPRFPPQAELLLLRGGIREGSVDLG
                     HAPLGPYSRGPHYDAGFTVLVPVFSLDGTGPELLLDLESCSAWLRLPELMRGILVREA
                     WLDCLGPPVPEESDMTPQTQGKESPTDRGNSVDQSHDCVPEPEPHMSLQKFSDLSGSQ
                     SPYNDIANLEAPEPLETPSSEALETDESPVPRPSEAAKVWPTLCPTQVASWFFVKLAE
                     VAESLIPVPGAPRLVHAARHAGVTTVLLATPEPPRHLLLFDLIPVVTVTGWPDAARSH
                     SWAGPLVSESSSFYLVPGSLPEQQGTSGWQLCFARQELALKARIPTPLLQAHAAAQAL
                     LRPLVAGTRAAAPYLLRTLLYWACERLPALYLARPENAGACCLGLLDELSRVLEAGTL
                     PHYFLSGRKLRMGDGSAALRGALAQLRGDPAQALREAVEEAKVARKGGGLAGVGGGTH
                     "
     exon            611..1943
                     /gene="Tmem102"
                     /gene_synonym="RGD1559450"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctttctgtg taccaccttt ccagctaccc cttcatcgga aagccgcgga ccaataagcc
       61 cttcttaaaa agaggtaaag ggaggtgggc aaaggccggt ggcaaagatt ggctattgta
      121 ttcccaggag ggaccaaata gctttttttt tttaacctgc tgagtcaggt gaaccgattc
      181 accgtgggac aaccggctta ggggaaaaaa aaaacccgaa ggaaatagtc acttgttcat
      241 cctaaagact aaacacagaa cgcatcatcc tcagaaccca cttgtggact gtctgtagcc
      301 cttgctctgc ctcagaggga ggggaaaact ggagaacttg ggaactgcca aagctaactg
      361 ggatctgttt gctccagcac caaacgatag acaactatgg cttccaccgt ctgggggggt
      421 gccccctggt ggggcccacc acccccagcc ccagcccggc ctctcacaga catagacttc
      481 tgctctggcg cacagctgca ggaactcact cagttgattc aggagctggg tgttcaggag
      541 agttggagtg aagggcccga acctggagcc gatcttctcc gagccaagga gtttgtcttc
      601 tctctactcg gtctagttca ccgccaggac cctcgttttc caccccaggc agaactcttg
      661 ctgcttcgcg gtggaattcg cgaaggttcc gtagatttag ggcacgcccc cttaggtccc
      721 tactcccggg gacctcatta tgatgccggc tttacagtcc ttgtgcctgt gttttctctg
      781 gatggcactg ggcccgagct gctactggat ctggaatcct gttctgcatg gctccgcctt
      841 ccagaactga tgcgcggaat tttggtccga gaggcctggc tggattgcct aggaccccct
      901 gtcccagaag aaagtgatat gactccccaa actcagggca aagagagtcc caccgaccgg
      961 ggaaactctg tagatcagtc acatgattgt gtccctgaac ctgagccaca tatgtctttg
     1021 caaaaattta gtgacctttc agggtcccaa tctccttata atgacatcgc caatcttgaa
     1081 gctcctgaac cattggaaac accgagtagt gaggccttgg aaaccgacga aagcccagtt
     1141 ccaaggccgt cggaggctgc aaaggtgtgg cccacattat gcccgaccca agtagcttct
     1201 tggttcttcg ttaagttggc tgaggttgct gagtccctga tccccgtccc aggcgccccg
     1261 cggctagttc atgcagctcg ccacgcgggt gtcaccactg tcctcctggc aactccagag
     1321 cccccacgcc acctcctgct cttcgacctg atcccggtgg tgaccgtgac aggctggccc
     1381 gacgcggctc ggagccactc gtgggcgggt ccactggtct ctgaatcgtc ctctttctac
     1441 ctagtgccgg gcagcctccc ggagcagcag ggcacctctg gatggcagtt gtgcttcgcc
     1501 cgccaggagc tggcgctcaa agcgcgcatc cccacgccgc tgcttcaggc acacgcggcg
     1561 gcccaggcgc tgctgcgccc gctggtggcg gggacccgag ccgctgcgcc ctacctcctg
     1621 cggaccttgc tctactgggc ttgcgagcgg ctcccggcgc tctacctggc gcggccggaa
     1681 aatgccggcg cttgttgcct tgggctactg gatgagctga gccgagtgct agaggccggg
     1741 acgctgcctc attatttttt gagcggccga aagctccgta tgggagacgg ctctgctgct
     1801 ctgcgcgggg cattggccca gcttcgcggg gaccctgcac aggccttgcg tgaggccgtg
     1861 gaggaagcca aggttgcccg caaagggggc ggtttagcgg gcgtaggggg cgggacccat
     1921 taaagattct actcctaagg gaa
//
