LOCUS       NM_001007619            1820 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus transmembrane p24 trafficking protein 5 (Tmed5),
            mRNA.
ACCESSION   NM_001007619 XM_214123
VERSION     NM_001007619.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Koegler,E., Bonnon,C., Waldmeier,L., Mitrovic,S., Halbeisen,R. and
            Hauri,H.P.
  TITLE     p28, a novel ERGIC/cis Golgi protein, required for Golgi ribbon
            formation
  JOURNAL   Traffic 11 (1), 70-89 (2010)
   PUBMED   19948005
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Breuza,L., Halbeisen,R., Jeno,P., Otte,S., Barlowe,C., Hong,W. and
            Hauri,H.P.
  TITLE     Proteomics of endoplasmic reticulum-Golgi intermediate compartment
            (ERGIC) membranes from brefeldin A-treated HepG2 cells identifies
            ERGIC-32, a new cycling protein that interacts with human Erv46
  JOURNAL   J Biol Chem 279 (45), 47242-47253 (2004)
   PUBMED   15308636
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079452.1.
            
            On Nov 29, 2004 this sequence version replaced XM_214123.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079452.1, CK478784.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..1820
                     /gene="Tmed5"
                     /gene_synonym="LRRG00120"
                     /note="transmembrane p24 trafficking protein 5"
                     /db_xref="GeneID:289883"
                     /db_xref="RGD:1359437"
     exon            1..265
                     /gene="Tmed5"
                     /gene_synonym="LRRG00120"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..766
                     /gene="Tmed5"
                     /gene_synonym="LRRG00120"
                     /note="transmembrane emp24 domain-containing protein 5;
                     p24gamma2; p24 family protein gamma-2; transmembrane emp24
                     protein transport domain containing 5"
                     /codon_start=1
                     /product="transmembrane emp24 domain-containing protein 5
                     precursor"
                     /protein_id="NP_001007620.1"
                     /db_xref="GeneID:289883"
                     /db_xref="RGD:1359437"
                     /translation="MGVRMWLPFPMLLLSALPATLLSGAAGFTPSLDSDFTFTLPAGQ
                     KECFYQPMPLKASLEIEYQVLDGGELDIDFHLASPEGRTLVFEQRKSDGVHTVETEDG
                     DYMFCFDNTFSTISEKVIFFELILDNMGEEVEGQEDWKKYITNTDVLEMKLEDILESI
                     NSIKSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSVVNLMVMVVVSAIQVYTLK
                     SLFEDKRKSRT"
     exon            266..363
                     /gene="Tmed5"
                     /gene_synonym="LRRG00120"
                     /inference="alignment:Splign:2.1.0"
     exon            364..547
                     /gene="Tmed5"
                     /gene_synonym="LRRG00120"
                     /inference="alignment:Splign:2.1.0"
     exon            548..1820
                     /gene="Tmed5"
                     /gene_synonym="LRRG00120"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcggatcgg gatttcacag cggaggcgcc ggcatcccgc acctccctat acacgtccag
       61 tgtgaaatcg acagggatgg gcgtcaggat gtggttgcca ttccccatgc tgctcctgtc
      121 cgctctgccc gcaacgttgc tgagcggggc ggccggcttc acaccctctt tggatagtga
      181 cttcaccttc acgctgcccg ccggccagaa ggagtgcttc taccagccca tgcccctgaa
      241 ggcgtcgttg gagatcgagt accaagtttt agatggagga gaattagata ttgatttcca
      301 ccttgcctct ccagagggca gaaccttagt ttttgaacaa agaaaatcag atggcgttca
      361 tactgtagag actgaagatg gcgactacat gttctgcttt gacaacacat tcagcaccat
      421 ctctgagaag gtcattttct ttgagttgat cctggataac atgggagaag aagttgaagg
      481 acaagaagac tggaaaaagt atattactaa cacagatgtt ctggagatga aactagaaga
      541 catcctggaa tccatcaaca gcatcaagtc cagactaagc aaaagtggcc acatacagac
      601 tctgcttaga gcatttgaag ctcgtgatcg aaacatacaa gaaagcaact ttgatagagt
      661 caatttctgg tctgtggtga acttgatggt catggtggtg gtgtcagcta ttcaagttta
      721 tacactgaaa agtctatttg aagataagag gaaaagtaga acttgaaact ccagcacaga
      781 ttacttaatg ttgaaaaaaa gaggtagaaa attctaatac actgtcacag tcaaaagata
      841 gtcatatttc ccataacatt ttcagaaatg tatgtaagtg taagatatgt aaattttaat
      901 atgaaaggaa aatcatcact ttatgtccag ataactttat tgacccagtt atacttaaaa
      961 ataaaacaag atgtcatata caatttatat ttaattgaat gaagccatat taactatttt
     1021 cctaaggtta aaaatctttc ctagatatca catatgaatg aaatgaaata acaatgttca
     1081 taaacatgcc accagtttgc ttttacctag aattttctct gtacatgtgg cagctacaaa
     1141 ttaattaatt aaagaagttt cctatacatt acattataaa tcacttgaga attatataat
     1201 catggactgg atagatcagc ttttctctac caaatctctc cataaaaata gaagcatacc
     1261 actgaaaaaa tatttccaat atttttacaa ccaaatataa tgtgaaatat ccactagtat
     1321 tattttatat acttatctat atttccaaaa gctaacattt ttataattaa aaccggaaag
     1381 gcattctttc ctcataaaat ttaggctagg ctgcgtcttt gtctttgata ataagatata
     1441 taaagggtgg ttgatgtttg tgaataagat gcattctgtc tagacattag ctgggattag
     1501 ggataagatg aatttatttt tatattacgc atcaacagtg ttatgctggc ttctgcacag
     1561 ctgttggtct tggcaatgca ttctcacaag caggtgtgag ggacggacat actactgaag
     1621 agatgtgatg tgagtgtaaa tagacagctc ctttctaaag tctcagtcat gagaaacacg
     1681 aacaacaagt ttacctaaga gaagtgtaat atctggaatc agaagggctc ttcttagggg
     1741 ctggggattt agctcagtgg tagagccctt acctaggaag cacaaggccc tgggttcggt
     1801 ccccagctcc gaaaaaaaaa
//
