LOCUS       XM_001071744             916 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane emp24 protein transport
            domain containing 11 (Tmed11), mRNA.
ACCESSION   XM_001071744
VERSION     XM_001071744.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001071744.8.
            
            On Jan 21, 2021 this sequence version replaced XM_001071744.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..916
                     /gene="Tmed11"
                     /note="transmembrane emp24 protein transport domain
                     containing 11; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 52% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:689712"
                     /db_xref="RGD:1588776"
     CDS             19..663
                     /gene="Tmed11"
                     /codon_start=1
                     /product="transmembrane emp24 domain-containing protein
                     11"
                     /protein_id="XP_001071744.1"
                     /db_xref="GeneID:689712"
                     /db_xref="RGD:1588776"
                     /translation="MQTQTILLCFSFSFSAAFYFHAGEREEKCIIEDIPSDTLITGTF
                     KIQQWDIGRHDFLESAPGLGMFVTVTNNDEVLLSKLYGAQGTFYFTSHSSGEHIICLE
                     SNSTQFVSFGGSKLRIHLDIRVGEHDLDAVIVQAKDKVNEVAFTLRHLIEQIEQILKE
                     QDYQRDREENFRITSEDTNRNVLWWAFAQILIFISVGIFQMKHLKDFFIAKKLV"
ORIGIN      
        1 ctggctaatg ctgtagagat gcaaactcag acaattctct tatgtttcag tttttccttt
       61 tcagctgctt tttatttcca tgctggggag cgagaggaga aatgtataat cgaagacatt
      121 ccaagtgaca cgttgataac agggacattc aagatacagc agtgggacat tggtagacat
      181 gactttcttg aatctgctcc tggcttagga atgtttgtga ctgttacaaa caatgatgag
      241 gtattattat ccaagttata tggtgcacaa gggacattct attttacttc acactcatct
      301 ggtgaacaca tcatttgctt agaatctaat tctacacaat ttgtgtcatt tggagggagt
      361 aagctgcgca tccacttaga tattcgagtt ggagagcatg accttgatgc agttattgtt
      421 caagcaaagg acaaagttaa tgaagtagcc ttcacgcttc gacatctaat tgaacaaatt
      481 gaacaaatac tcaaagaaca agactatcaa agggaccgtg aggaaaattt ccgtatcacc
      541 agtgaagata ccaatagaaa tgttttatgg tgggctttcg cacaaatatt aatctttatc
      601 tcagttggaa tttttcaaat gaagcacctt aaagatttct tcatagctaa gaagcttgtt
      661 taaaacacaa gttaaagtaa ataatttgta caatgtttga gttaataaac caaaatacat
      721 gcataagtct gctattttct gatttaaaag atattagata ttgaagttaa tattatagat
      781 ggcattcctg gtttttaaaa agtgtcactt taataatgta gcttctgaat gtggtaaaaa
      841 aaaaataagc acgtcgtttt aatttaaact tgatataaat cagcaatacc aaatgagcta
      901 cagatgcaat tttaag
//
