LOCUS       NM_001039612            1294 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus transmembrane BAX inhibitor motif containing 7
            (Tmbim7), mRNA.
ACCESSION   NM_001039612 XM_008762707
VERSION     NM_001039612.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1294)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1294)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC105862.1.
            
            On or before May 5, 2015 this sequence version replaced
            XM_008762707.1, NM_001039612.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC105862.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-996               BC105862.1         1-996
            997-1294            BC105862.1         998-1295
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q13"
     gene            1..1294
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /note="transmembrane BAX inhibitor motif containing 7"
                     /db_xref="GeneID:362319"
                     /db_xref="RGD:1306626"
     exon            1..67
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
     exon            68..194
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
     CDS             193..1104
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /codon_start=1
                     /product="bax inhibitor 1-like"
                     /protein_id="NP_001034701.2"
                     /db_xref="GeneID:362319"
                     /db_xref="RGD:1306626"
                     /translation="MKIDLEVSEPVNFSSGDHQHLVHKAAIKSNSGKLDQQPFTSSSG
                     DRPQEAIKYPYPRSRDGANAYAVQISEDATPPNESVNLSGPFENTSIRKGFIVKVFVV
                     LSAQLLITAAIISIFVFCEAVRKWIIAMPWFMYALLPAVLIVIVILACCRDIRRQVPA
                     NYILLVFFTILEGLLLGSMSVFYKADEILWATGATTAVTLVLTLFALQTKWDFTLLNG
                     MLFVFTSVLVIYGIVTLVVRSYWLHLVYSALGTLLFSMYLVMDVQMMVGGRYHYEIDP
                     EEYIFAALNIYVDIINLFIFILDLIGR"
     exon            195..472
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
     exon            473..551
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
     exon            552..605
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
     exon            606..696
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
     exon            697..734
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
     exon            735..822
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
     exon            823..912
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
     exon            913..960
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
     exon            961..1266
                     /gene="Tmbim7"
                     /gene_synonym="RGD1306626"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttttactac ctgcctggct gtttggatgg ctgctggctc agcagtcagg agaagcttga
       61 ggaccaggac gccgtggaca ccagcttggt catttgagca tctttcagtg accttcagct
      121 ttgtgtgaag attcctttca tagacaagct ccagacttta tcatataggg gaatatttcc
      181 tttgtcttca aaatgaaaat agacttggag gtcagtgagc cggtcaactt cagctcagga
      241 gatcatcaac atctggttca taaggcagca attaaaagta actccggcaa actggatcag
      301 cagcccttca caagttcatc tggagacagg ccacaggaag ccataaaata tccgtatccg
      361 aggagtagag acggagcaaa cgcctatgca gtacaaattt ctgaggatgc tacaccccca
      421 aacgagagcg taaacctatc cggtcccttt gaaaacacgt ccatccgtaa agggttcatt
      481 gtgaaagtgt ttgttgttct ctcggctcag ctgctcatca ctgcagcaat catcagcatc
      541 tttgttttct gcgaagctgt aagaaagtgg atcatcgcca tgccctggtt catgtatgca
      601 ctcctcccag cagtcctgat tgtgatcgtt atacttgctt gctgtaggga tatccggcgc
      661 caagtgccag cgaactacat tctcctggta ttctttacca ttctggaagg cctgctgcta
      721 ggaagcatgt ccgtcttcta caaagcagat gagatactgt gggccacagg agccaccact
      781 gcggtgacat tagtactcac tttgtttgca ctacaaacaa aatgggattt taccctgcta
      841 aatggaatgc tgtttgtttt caccagtgtg ctagtgatct acgggattgt cacacttgtg
      901 gttcgatcat attggctgca tctggtatac tcagcactcg gaacactgct cttctccatg
      961 tacctggtga tggacgtgca gatgatggtg ggggggcgct accactatga gatagacccc
     1021 gaagagtaca tttttgctgc tctgaacatc tacgtggaca tcatcaacct tttcattttc
     1081 attttggacc tgattgggcg atagctgatg gctgaagctg gctaagcctc agaagaggaa
     1141 aggtggggca cccgtggcat ggctaccagg ctcaggcgtg cggtggtgac cattcatggg
     1201 ccctttgaat agtcactcat ttaccaattg atctgtctat ttatgtcaat aaaagctaag
     1261 aatgtaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//
