LOCUS       NM_199116                862 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus transmembrane BAX inhibitor motif containing 4
            (Tmbim4), mRNA.
ACCESSION   NM_199116 XM_343211
VERSION     NM_199116.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   de Mattia,F., Gubser,C., van Dommelen,M.M., Visch,H.J.,
            Distelmaier,F., Postigo,A., Luyten,T., Parys,J.B., de Smedt,H.,
            Smith,G.L., Willems,P.H. and van Kuppeveld,F.J.
  TITLE     Human Golgi antiapoptotic protein modulates intracellular calcium
            fluxes
  JOURNAL   Mol Biol Cell 20 (16), 3638-3645 (2009)
   PUBMED   19553469
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Gubser,C., Bergamaschi,D., Hollinshead,M., Lu,X., van
            Kuppeveld,F.J. and Smith,G.L.
  TITLE     A new inhibitor of apoptosis from vaccinia virus and eukaryotes
  JOURNAL   PLoS Pathog 3 (2), e17 (2007)
   PUBMED   17319741
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Mar 19, 2021 this sequence version replaced NM_199116.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC060596.1, FQ228009.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-163               JAXUCZ010000007.1  57604275-57604437
            164-272             JAXUCZ010000007.1  57611331-57611439
            273-378             JAXUCZ010000007.1  57612756-57612861
            379-412             JAXUCZ010000007.1  57615552-57615585
            413-530             JAXUCZ010000007.1  57616794-57616911
            531-576             JAXUCZ010000007.1  57617876-57617921
            577-862             JAXUCZ010000007.1  57618576-57618861
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q22"
     gene            1..862
                     /gene="Tmbim4"
                     /gene_synonym="Cgi119"
                     /note="transmembrane BAX inhibitor motif containing 4"
                     /db_xref="GeneID:362884"
                     /db_xref="RGD:735173"
     exon            1..163
                     /gene="Tmbim4"
                     /gene_synonym="Cgi119"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..783
                     /gene="Tmbim4"
                     /gene_synonym="Cgi119"
                     /note="transmembrane BAX inhibitor motif-containing
                     protein 4"
                     /codon_start=1
                     /product="protein lifeguard 4"
                     /protein_id="NP_954547.1"
                     /db_xref="GeneID:362884"
                     /db_xref="RGD:735173"
                     /translation="MADTDPRYPRSSIEDDFNYGSCVASASVHIRMAFLRKVYSILSL
                     QVLLTTVTSALFLYFETLRTFVHDSPALIVVFALGSLGLIFALTLHRHTHPLNLYLLF
                     AFTLSEALTVATVVTFYDGHLVLHAFILTAAVFLGLTAYTLQSKRDFSKFGAGLFACL
                     WILCLAGFLKVFFYSQTVELVLASLGALLFCGFIIYDTHSLMHRLSPEEYVLAAISLY
                     LDIINLFLHLLKFLDAVNKK"
     exon            164..272
                     /gene="Tmbim4"
                     /gene_synonym="Cgi119"
                     /inference="alignment:Splign:2.1.0"
     exon            273..378
                     /gene="Tmbim4"
                     /gene_synonym="Cgi119"
                     /inference="alignment:Splign:2.1.0"
     exon            379..412
                     /gene="Tmbim4"
                     /gene_synonym="Cgi119"
                     /inference="alignment:Splign:2.1.0"
     exon            413..530
                     /gene="Tmbim4"
                     /gene_synonym="Cgi119"
                     /inference="alignment:Splign:2.1.0"
     exon            531..576
                     /gene="Tmbim4"
                     /gene_synonym="Cgi119"
                     /inference="alignment:Splign:2.1.0"
     exon            577..862
                     /gene="Tmbim4"
                     /gene_synonym="Cgi119"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcactcccg gaagtgggtg aaggcggttg tggtcagtgt aggcaggtgc agctgctact
       61 gacgacatgg ctgatacgga cccgcgctat ccccgctctt ccatcgagga tgacttcaac
      121 tatggcagct gcgtggcgtc ggccagcgtg cacattcgca tggcctttct caggaaagtc
      181 tacagcatcc tgtctctgca agttctccta acgacagtga cctctgccct gttcctgtat
      241 ttcgaaacct tgcgtacttt tgtccatgac agccctgcct taattgtggt gtttgctctc
      301 ggatctctgg gcttgatctt tgcgttgact ctgcacagac acacgcatcc tctgaacctc
      361 tatctgcttt ttgcatttac actgtcagaa gccctgaccg tggcaactgt tgttactttc
      421 tatgatgggc atctggttct gcatgcgttt atactgactg ctgcagtctt tcttggcttg
      481 actgcctata ctctacaatc aaagagagat ttcagcaaat tcggagcagg gctgtttgct
      541 tgtttatgga ttttgtgcct ggcaggattc ttgaaggtgt tcttttatag tcagacggtg
      601 gaactggtct tggcctctct aggtgccctc ctcttctgtg gattcatcat ctatgacaca
      661 cactcgctga tgcacagact ctcacctgaa gagtacgtgt tggctgccat cagtctctac
      721 ttggatatca tcaatctctt cctgcacctg ctgaagtttc tggacgcagt taataaaaag
      781 taactgaaca gtattcagag acagttttat tatgaaaaaa gtttgaatta tacttaagta
      841 ttaaaagcat ttgtgatctt ta
//
