LOCUS       NM_001106267             947 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus TM2 domain containing 3 (Tm2d3), transcript
            variant 1, mRNA.
ACCESSION   NM_001106267 XM_001056632 XM_214962
VERSION     NM_001106267.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Apr 3, 2023 this sequence version replaced NM_001106267.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR21887623.2171711.1,
                                           SRR26360194.187359.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-108               JAXUCZ010000001.1  128677680-128677787
            109-201             JAXUCZ010000001.1  128678071-128678163
            202-386             JAXUCZ010000001.1  128679364-128679548
            387-561             JAXUCZ010000001.1  128682636-128682810
            562-637             JAXUCZ010000001.1  128684737-128684812
            638-947             JAXUCZ010000001.1  128687271-128687580
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..947
                     /gene="Tm2d3"
                     /gene_synonym="RGD1564929"
                     /note="TM2 domain containing 3"
                     /db_xref="GeneID:292995"
                     /db_xref="RGD:1564929"
     exon            1..108
                     /gene="Tm2d3"
                     /gene_synonym="RGD1564929"
                     /inference="alignment:Splign:2.1.0"
     CDS             18..803
                     /gene="Tm2d3"
                     /gene_synonym="RGD1564929"
                     /note="isoform 1 is encoded by transcript variant 1; TM2
                     domain-containing protein 3"
                     /codon_start=1
                     /product="TM2 domain-containing protein 3 isoform 1"
                     /protein_id="NP_001099737.1"
                     /db_xref="GeneID:292995"
                     /db_xref="RGD:1564929"
                     /translation="MEAAAEPLRSVRHLSRVLLFLSQCYILSGDGSLNLDHSQPLAQS
                     IKDPGPTRIFIVVPRAAENQLFSHLTESTEIPPYMMKCPSNGLCSRLPADCIECATNA
                     SCTYGKPVTFDCTVKPSVTCVDQDLRPQRNFVINMTCRFCWQLPETDYECSNSTTCMT
                     VACPRQRYFANCTVRDHIHCLGNRTFPKLLYCNWTGGYKWSTALALSITLGGFGADRF
                     YLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI"
     exon            109..201
                     /gene="Tm2d3"
                     /gene_synonym="RGD1564929"
                     /inference="alignment:Splign:2.1.0"
     exon            202..386
                     /gene="Tm2d3"
                     /gene_synonym="RGD1564929"
                     /inference="alignment:Splign:2.1.0"
     exon            387..561
                     /gene="Tm2d3"
                     /gene_synonym="RGD1564929"
                     /inference="alignment:Splign:2.1.0"
     exon            562..637
                     /gene="Tm2d3"
                     /gene_synonym="RGD1564929"
                     /inference="alignment:Splign:2.1.0"
     exon            638..947
                     /gene="Tm2d3"
                     /gene_synonym="RGD1564929"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcacgcgcac cggcaagatg gaggctgcgg ccgagccgct gcggtctgtc cgccacctgt
       61 cccgcgtgct gctcttcctg tcccagtgct acattctgtc gggcgatgga tccttaaatt
      121 tagaccattc gcagccgctg gctcagtcaa taaaggatcc gggcccaaca cgtatattca
      181 tagtagttcc cagggcagca gagaatcagc tgttctctca cctcacagaa agtactgaga
      241 tccctcctta catgatgaag tgtccaagca atggcttatg tagcagactt cctgcagact
      301 gcatagagtg tgcgaccaat gcctcctgta cttatgggaa gcctgtcacg tttgactgca
      361 cggtgaaacc ctctgttacc tgtgtcgatc aagacctcag gccccagagg aacttcgtca
      421 tcaacatgac ttgcaggttt tgctggcagc ttcctgagac agactatgag tgttcaaatt
      481 ccaccacctg catgaccgtg gcctgccctc ggcagcgcta ctttgccaac tgcactgtgc
      541 gcgaccacat tcattgcttg ggtaaccgga ctttccctaa actgctgtac tgcaactgga
      601 ctggaggcta caagtggtcg acggctctgg ctctgagcat cacccttggg ggctttggag
      661 cggatcgctt ctacctgggc cagtggcgtg aaggcctcgg caagctcttc agctttggtg
      721 gtctgggaat atggacccta atcgacgtct tgctgattgg agttggctat gtggggccag
      781 cggatggctc tttgtacatt tagtgtggtt atgtgcttca gagagcagtg cgtagagtcc
      841 tttgtgcgag gtggacatgg tgtaagaggg gtatttatgt ttttaatgta cagcatctgt
      901 acttggcttg ccttgatgaa ggtaaaataa agaaatggaa cactgaa
//
