LOCUS       NM_001398847            1097 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus TLC domain containing 2 (Tlcd2), mRNA.
ACCESSION   NM_001398847 XM_573142
VERSION     NM_001398847.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Ruiz,M., Bodhicharla,R., Svensk,E., Devkota,R., Busayavalasa,K.,
            Palmgren,H., Stahlman,M., Boren,J. and Pilon,M.
  TITLE     Membrane fluidity is regulated by the C. elegans transmembrane
            protein FLD-1 and its human homologs TLCD1/2
  JOURNAL   Elife 7, e40686 (2018)
   PUBMED   30509349
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Dec 27, 2021 this sequence version replaced XM_573142.7.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ219135.1, SRR26643290.35873.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMEA5760434
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-297               JAXUCZ010000010.1  60809391-60809687
            298-380             JAXUCZ010000010.1  60809902-60809984
            381-463             JAXUCZ010000010.1  60810186-60810268
            464-1097            JAXUCZ010000010.1  60810966-60811599
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..1097
                     /gene="Tlcd2"
                     /gene_synonym="RGD1562631"
                     /note="TLC domain containing 2"
                     /db_xref="GeneID:497955"
                     /db_xref="RGD:1562631"
     exon            1..297
                     /gene="Tlcd2"
                     /gene_synonym="RGD1562631"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..964
                     /gene="Tlcd2"
                     /gene_synonym="RGD1562631"
                     /codon_start=1
                     /product="TLC domain-containing protein 2"
                     /protein_id="NP_001385776.1"
                     /db_xref="GeneID:497955"
                     /db_xref="RGD:1562631"
                     /translation="MASGGLLVAGASFAAFQGLHWGLQLMPTPESVRDRWMWRNIFVS
                     LMHSLLSGTGALVGLWLFPQMVTDPIYDHPSWARVLVAVSVGYFVADGVDMLWNQTLA
                     QAWDLLCHHLVVVSCLSTAVVSGHFVGFSMVSLLLELNSICLHLRKLLLLSHKASSLA
                     FRVSSWATLTTLVLFRLLPLGWMSLWLFQQHYQVSLALVILCGTGLVTVGSISISLGV
                     RILIKDVLQPRPYPFILVHKETQQTKTCEPVTRNNSTLSLKGMEVFSSVNPQGGGAGK
                     RRW"
     exon            298..380
                     /gene="Tlcd2"
                     /gene_synonym="RGD1562631"
                     /inference="alignment:Splign:2.1.0"
     exon            381..463
                     /gene="Tlcd2"
                     /gene_synonym="RGD1562631"
                     /inference="alignment:Splign:2.1.0"
     exon            464..1097
                     /gene="Tlcd2"
                     /gene_synonym="RGD1562631"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagaagcccc cggcacagcc aggtggaaaa gacagatccc aactcctccg gggccattcg
       61 aggttccggg catcgggtac caggatcaaa gacacagact gaaacctagc tgacctgcca
      121 gaccatggca tccgggggac tccttgtggc tggcgcctcc ttcgcggcgt ttcagggact
      181 gcactggggg ctgcagctga tgcccacccc ggaatccgtt cgggaccgct ggatgtggcg
      241 gaacattttc gtttcgctga tgcacagcct actctctgga acaggggcac tggtcgggct
      301 gtggctgttt cctcagatgg tcaccgaccc gatttatgat cacccatcgt gggcacgggt
      361 cctagtagca gtgtcagtgg gttatttcgt ggcagacgga gttgacatgc tgtggaatca
      421 gacgttggcc caggcctggg accttctctg ccaccaccta gtggtagtga gctgcctcag
      481 caccgccgtt gtgtctggcc actttgtggg cttctctatg gtatctctac ttctggagct
      541 gaactccatc tgtctgcatc tacggaagct gctgctgctc tcccataagg cctcatcctt
      601 ggccttcaga gtaagcagtt gggccaccct gaccaccctg gtcctcttcc gccttctacc
      661 tctgggatgg atgagtctgt ggttgtttca gcagcactac caggtgtctc ttgctctggt
      721 catcctttgt ggaactgggc tggtcacggt gggtagcata agcatctcat tgggagttcg
      781 aattctgatc aaggatgtct tgcagcctcg gccctaccca tttatccttg tgcacaagga
      841 gactcagcaa accaagacat gtgagcctgt caccaggaac aattccactc tcagtctgaa
      901 aggcatggag gttttctctt ctgtcaaccc tcagggaggt ggggctggga agaggaggtg
      961 gtaacccact gcatagttta ctgtgtagca agggctaaac tgtatcatca gtgtctcagg
     1021 acctttttca ggtaactcac ttctctcccc tttccaagat ccaagaagaa atttggcggt
     1081 tagtagctat gtgcaaa
//
