LOCUS       NM_001109534            2438 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus transketolase-like 1 (Tktl1), mRNA.
ACCESSION   NM_001109534 XM_001065706
VERSION     NM_001109534.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2438)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474099.1.
            
            On Oct 4, 2007 this sequence version replaced XM_001065706.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2438
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq37"
     gene            1..2438
                     /gene="Tktl1"
                     /note="transketolase-like 1"
                     /db_xref="GeneID:689374"
                     /db_xref="RGD:1593490"
     CDS             1..1791
                     /gene="Tktl1"
                     /EC_number="2.2.1.1"
                     /codon_start=1
                     /product="transketolase-like protein 1"
                     /protein_id="NP_001103004.1"
                     /db_xref="GeneID:689374"
                     /db_xref="RGD:1593490"
                     /translation="MSEAEASVGMAHDAGPDEKTLQVLRDMANRLRIRFIRTTSSSTT
                     SYLTPCSSAAEIMSVLFFYTMRYKQEDPENPDNDRCILSKGIPFVKVATGWPGQGLGA
                     ARGMAYTGKYFDQASYRVFCLLGDEESTEGSVWEAFAFASYYNLDNLMAIFDVNRIGH
                     SSSMSVEHCVGIYQKRCEAFGWNTYVVDGRNVETLCRVFSQAAQVRGKPTAVVAKTFK
                     ARGMPNVEDAESWHGRPMPKERADAIIKLIESQIQSNKILVPSPPIENSPQINIMDIH
                     MASPPAYVADDMVSTQRACGLALAKLGHENDRVIVLDSDTENCNFSDIFKKEHPERFI
                     QCYIAEQNMVNVALGCATRDRIIAFACTFAAFFTRAFDQIRVGAISQININLIGCHCG
                     VSTGDDNPYHMALEDLAMFRAIPNCIVFYPSDAVSTEHAIYLAANTKEMCFIHTSQAE
                     TAIIYTTQETFEIGQAKVVRHSNDDKVIVIGAGVTLHEALVAADELSKEDISIRVIDL
                     FTIKPLDSATIISNAKATGGRIVTVEDHYLEGGIGGAVCAAVSMEPNIVVHRLAVMDV
                     PRSGRCNEALDFSGISSRHIIVAVKCILMN"
     exon            1..134
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            135..252
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            253..350
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            351..542
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            543..670
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            671..864
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            865..1029
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1030..1186
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1187..1317
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1318..1401
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1402..1498
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1499..1618
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1619..2438
                     /gene="Tktl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtcagaag ctgaggcaag cgttgggatg gcccacgatg ctgggcctga tgaaaagaca
       61 ttgcaggtgt tgcgggacat ggccaaccgc ctgcgaatcc gttttatcag gaccacaagt
      121 tcctcgacca ctagctatct cacaccatgc agcagtgctg ctgagatcat gtctgtgcta
      181 tttttctata caatgagata taaacaggaa gaccctgaaa acccagacaa tgaccgatgc
      241 atcctttcaa agggaatacc gtttgttaaa gtagcaacag gatggcctgg gcaaggacta
      301 ggagctgccc gtgggatggc atatactggc aagtactttg accaagccag ctaccgggtg
      361 ttctgtcttc tgggggatga agagtccaca gaaggctctg tttgggaggc atttgccttt
      421 gcatcctact acaatctgga caatcttatg gcaatctttg atgtgaaccg cattggacac
      481 agtagctcca tgtctgttga gcactgcgtt ggcatctacc agaagcgttg tgaagccttt
      541 gggtggaata cttacgtggt ggatggccgt aatgtggaga ccctatgccg tgtattctca
      601 caggcagctc aagtaagagg caagcccact gctgtggttg ccaaaacctt caaggcccga
      661 ggcatgccaa atgttgagga tgcagaaagt tggcatggaa ggccaatgcc aaaagaaaga
      721 gcagatgcaa ttatcaaatt aattgagagc cagatacagt ccaacaaaat tcttgtacct
      781 tcacccccta ttgagaactc acctcaaatt aacatcatgg atatacatat ggcctcgccc
      841 cctgcttatg tagctgatga catggtgtct actcaaagag catgtggttt ggctctggct
      901 aaactgggcc atgaaaatga cagagttatt gtgctggata gtgacaccga gaactgcaac
      961 ttttctgaca tattcaagaa agaacaccca gagaggttca tccagtgtta tattgctgaa
     1021 caaaacatgg tgaatgtggc tctaggatgt gccacccgtg accggatcat tgcttttgct
     1081 tgcacctttg ctgccttttt cacccgagca tttgatcaga ttcgagtggg agccatctct
     1141 caaatcaaca tcaaccttat tggttgtcac tgtggggtat ctactggtga tgacaacccc
     1201 taccatatgg cattggaaga cctggcaatg ttccgagcaa ttcctaattg cattgttttc
     1261 tatccaagtg atgctgtctc cacagagcat gctatttact tagcagccaa tactaaggaa
     1321 atgtgcttca ttcataccag ccaagcagaa acagcaatta tttacaccac tcaagaaact
     1381 tttgagattg gacaggccaa ggttgtccgc catagtaacg atgacaaggt catagttatt
     1441 ggagcaggag tcactctgca tgaagcccta gtagctgctg atgagctctc taaagaagat
     1501 atttctatcc gtgtcattga tttgtttacc attaaacctc tggacagtgc caccatcatt
     1561 tccaatgcaa aagccacagg tggccgaatt gtcaccgtgg aggatcacta tctagaaggt
     1621 ggcattggag gagctgtctg tgcagcagtc tccatggagc ctaacattgt ggttcatcgg
     1681 ctcgcagtga tggatgtgcc tcggagtgga agatgcaatg aagcactaga tttttctgga
     1741 atcagttcca gacacatcat tgtggctgtg aaatgcatct taatgaacta aattagctgt
     1801 tggctttggt cttagaatat tagcctcttc tctgtatgtt tatgcttatg ccaaaaccat
     1861 aagttagaaa tgattgtgct ttgttttcct taaaggcaaa accagttaac aactttgttc
     1921 cacattcaga aattctaatt tccgtttaat ctgtaactac atatacaaat attactgttt
     1981 taaccatcaa aatgggtcat aaaatttata atggcagaat agctaacaag acaatcacct
     2041 gacactgaac tttctcatta gactgaatat aaatggatta aggaacactg tagaagtgtc
     2101 agtttaaaag tatttccttc ataagtaaag caaatgtgtg tggaattgta gtcctcagac
     2161 cacctgtcac agaactagac ccctgagata catagtgctg ttcaactaaa gttaacatgt
     2221 atactgcctt cctacctgca gcttcctgag ttatgtgtaa cttcagatgc tcttgacttt
     2281 tctctgctat ttccctttat atcccctcta cagttcacag gtcgatgaac aaaataaaag
     2341 cagttaggat gacttctgct gttctggtga ctgttctgtg aagacataag gatacttcat
     2401 ctccacacta tcctgtttga tgttaataaa gcatttaa
//
