LOCUS       XM_002730066            1182 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus TIMELESS interacting protein like 1
            (Tipinl1), mRNA.
ACCESSION   XM_002730066
VERSION     XM_002730066.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_002730066.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1182
                     /gene="Tipinl1"
                     /note="TIMELESS interacting protein like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 6 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100359731"
                     /db_xref="RGD:2323509"
     CDS             38..868
                     /gene="Tipinl1"
                     /codon_start=1
                     /product="TIMELESS-interacting protein"
                     /protein_id="XP_002730112.1"
                     /db_xref="GeneID:100359731"
                     /db_xref="RGD:2323509"
                     /translation="MLEQEENGLFEIPDYEHVEDETFPPFPPPGSPERDPAEAEADEG
                     SGAPVPVPPKRIVKRNIPKLDATRLTSERGLPALRHVFDKTKFKGKGHEAEDLKTLIR
                     HMEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIRLDLPIVHEDFVNNNDEVEE
                     TNSLDAAATGFDAFVTSSSDSKRFASEASRNLTEEQQQRIERNKQLALERRQAKLLSN
                     SQSLENDVTVEESSTGENQEESNGLISADGPHDVPSASTQEEGQLEAEETQLDHPNLD
                     "
ORIGIN      
        1 cacgcttggc ggtggccgcc gtttgggtga ggaaaaaatg ttggagcaag aagaaaatgg
       61 cttgtttgaa ataccagatt atgaacatgt agaggatgaa acttttcctc ccttcccacc
      121 tccgggctct ccagagagag atcctgcaga agctgaagct gatgaaggga gtggagcacc
      181 tgttcctgtt ccgccaaaga gaatagttaa aaggaatata cccaagctag atgctacaag
      241 attgacttca gagagagggc ttccagcctt aaggcatgta tttgataaga caaaattcaa
      301 ggggaaaggt catgaggctg aagacttgaa aacgctaatc agacacatgg agcactgggc
      361 gcataggcta ttccccaaac tgcaatttga agattttatt gacagagttg aaaacctagg
      421 aaataaaaag gaggttcaga cctgtttaaa acgaattcga cttgatctgc ctattgtaca
      481 tgaagatttt gttaacaata acgatgaagt tgaggaaact aacagccttg atgcagctgc
      541 cactggattt gatgcctttg tgacaagttc atctgacagc aagaggtttg cttctgaagc
      601 gagtagaaac ctaacagaag agcagcagca gagaattgag agaaataaac aactggcctt
      661 ggaaagaagg caggcaaagc tattgagtaa tagccagtcc ctagaaaatg acgtgacagt
      721 tgaagagagc agtactggtg agaatcaaga agagtcaaat ggattgatct ctgctgatgg
      781 tccacatgac gttccttctg ccagcacaca ggaagaagga cagttggaag cagaggaaac
      841 acagctggac catcctaact tagactaatc cagaaatgtt ctaagtagcc aaccctctac
      901 agcagaatcc tacaggcttg gagttatttg tagttttttc tactttgtat aaatccttaa
      961 gtcttaaggc ttctgtggat tcctgtttaa aatacgatga ctatttaaat tgtttcctac
     1021 ttattttagt aagtctattt attatttttg gtgttctgta taagtctgac tttataagct
     1081 gttttgtagt ttgcattgaa ttgtttctta ctaaattggg taatgattaa aatgtaaata
     1141 tgccctgact gttaggtcag tttttataaa gaaataaatt at
//
