LOCUS       NM_133604                897 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus translocase of inner mitochondrial membrane 9
            (Timm9), transcript variant 1, mRNA; nuclear gene for mitochondrial
            product.
ACCESSION   NM_133604
VERSION     NM_133604.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Hohr,A.I., Straub,S.P., Warscheid,B., Becker,T. and Wiedemann,N.
  TITLE     Assembly of beta-barrel proteins in the mitochondrial outer
            membrane
  JOURNAL   Biochim Biophys Acta 1853 (1), 74-88 (2015)
   PUBMED   25305573
  REMARK    Review article
REFERENCE   2  (bases 1 to 897)
  AUTHORS   Webb,C.T., Gorman,M.A., Lazarou,M., Ryan,M.T. and Gulbis,J.M.
  TITLE     Crystal structure of the mitochondrial chaperone TIM9.10 reveals a
            six-bladed alpha-propeller
  JOURNAL   Mol Cell 21 (1), 123-133 (2006)
   PUBMED   16387659
REFERENCE   3  (bases 1 to 897)
  AUTHORS   Muhlenbein,N., Hofmann,S., Rothbauer,U. and Bauer,M.F.
  TITLE     Organization and function of the small Tim complexes acting along
            the import pathway of metabolite carriers into mammalian
            mitochondria
  JOURNAL   J Biol Chem 279 (14), 13540-13546 (2004)
   PUBMED   14726512
REFERENCE   4  (bases 1 to 897)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   5  (bases 1 to 897)
  AUTHORS   Paschen,S.A., Rothbauer,U., Kaldi,K., Bauer,M.F., Neupert,W. and
            Brunner,M.
  TITLE     The role of the TIM8-13 complex in the import of Tim23 into
            mitochondria
  JOURNAL   EMBO J 19 (23), 6392-6400 (2000)
   PUBMED   11101512
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1 and CB775939.1.
            
            Transcript Variant: This variant (1) represents the longest
            transcript. Variants 1, 2 and 3 encode the same protein.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ228524.1, DV215568.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN12840111,
                                           SAMN12840115 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-21                JAXUCZ010000006.1  95358875-95358895   c
            22-416              CB775939.1         1-395
            417-897             JAXUCZ010000006.1  95346065-95346545   c
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q24"
     gene            1..897
                     /gene="Timm9"
                     /gene_synonym="Tim9; Tim9a; Timm9a"
                     /note="translocase of inner mitochondrial membrane 9"
                     /db_xref="GeneID:171139"
                     /db_xref="RGD:621656"
     exon            1..134
                     /gene="Timm9"
                     /gene_synonym="Tim9; Tim9a; Timm9a"
                     /inference="alignment:Splign:2.1.0"
     exon            135..220
                     /gene="Timm9"
                     /gene_synonym="Tim9; Tim9a; Timm9a"
                     /inference="alignment:Splign:2.1.0"
     exon            221..285
                     /gene="Timm9"
                     /gene_synonym="Tim9; Tim9a; Timm9a"
                     /inference="alignment:Splign:2.1.0"
     CDS             247..516
                     /gene="Timm9"
                     /gene_synonym="Tim9; Tim9a; Timm9a"
                     /note="translocase of inner mitochondrial membrane 9
                     homolog"
                     /codon_start=1
                     /product="mitochondrial import inner membrane translocase
                     subunit Tim9"
                     /protein_id="NP_598288.1"
                     /db_xref="GeneID:171139"
                     /db_xref="RGD:621656"
                     /translation="MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPE
                     EVTCSEHCLQKYLKMTQRISMRFQEYHIQQNEALAAKAGLLGQPR"
     exon            286..381
                     /gene="Timm9"
                     /gene_synonym="Tim9; Tim9a; Timm9a"
                     /inference="alignment:Splign:2.1.0"
     exon            382..897
                     /gene="Timm9"
                     /gene_synonym="Tim9; Tim9a; Timm9a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atcactgccc ccacgtgttc tccgctatct agcggcgcgg cgctctctcg gtactgaccc
       61 tccgagctcg gactctacct gcactgcagc ccttcatccc ggtaccagtg tcagatgcga
      121 gatcccgtgg ctaagtaaga aatccaattt cactgaggac aagcagaagg ccgggcgctt
      181 gcttttccag agcagaaagg aaactgatgc atcagaaaag gtgactaata aacatactga
      241 aagaatatgg ctgcacagat accagaatct gaccagataa aacagtttaa ggagttcctg
      301 ggaacctaca ataaacttac agaaacctgc tttttggact gtgttaaaga cttcacaaca
      361 agagaggtga aacctgaaga ggttacctgt tcagaacatt gcttacagaa atatttaaaa
      421 atgacacaga gaatatccat gagatttcag gaatatcaca ttcagcagaa tgaagccctg
      481 gcagccaaag caggcctctt aggccaacca cggtagaggc cggaggcacg gacttgcact
      541 gagagattgc cagcagctgt cacagtcaga acaaggattc gtctggtgga gaatcccctg
      601 acacagcaag cgccgtggta catcatctgt catgactacc tggccaacgg aaaccaccgg
      661 agaaaaaatc actgttcacc agaaagagtc aaaacagaag gcctttctgt gcagtagaaa
      721 tggtaagatg cagtgttgtt gaggccttaa gattcgtctg cgtggtcacc atgattgcaa
      781 aaataaacca ctgttctttt ctttgtgact gttaatttta aaagcaaaat atgtgtccaa
      841 tcatgtatga gatagaaaaa atttattact aaaagtaaaa taagtgaaaa tatcatt
//
