LOCUS       NP_001101043             470 aa            linear   ROD 22-MAR-2023
DEFINITION  tigger transposable element-derived protein 3 [Rattus norvegicus].
ACCESSION   NP_001101043 XP_001071012 XP_219522
VERSION     NP_001101043.1
DBSOURCE    REFSEQ: accession NM_001107573.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 470)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XP_219522.1, XP_001071012.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132263 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     Protein         1..470
                     /product="tigger transposable element-derived protein 3"
                     /note="tigger transposable element derived 3 homolog"
                     /calculated_mol_wt=52284
     Region          6..57
                     /region_name="CENP-B_N"
                     /note="CENP-B N-terminal DNA-binding domain; pfam04218"
                     /db_xref="CDD:461229"
     Region          76..133
                     /region_name="HTH_Tnp_Tc5"
                     /note="Tc5 transposase DNA-binding domain; pfam03221"
                     /db_xref="CDD:460850"
     Region          193..360
                     /region_name="DDE_3"
                     /note="DDE superfamily endonuclease; cl46863"
                     /db_xref="CDD:481203"
     CDS             1..470
                     /gene="Tigd3"
                     /coded_by="NM_001107573.1:174..1586"
                     /db_xref="GeneID:309174"
                     /db_xref="RGD:1305393"
ORIGIN      
        1 melntkkklh alslaekiqv lelldeskms qsevarrfqv sqpqisrick nkeklladwc
       61 sgtanherkr kreskysgid eallcwyhia rakawdvtgp mllhkakela dimgqdfvps
      121 igwlvrwkrr nnvgfgtrqv lvpllppepp pavspsqaqp plslkdfspe dvfgcaevpl
      181 lyravpgrvf ecdrlqvllc ansrgtekrr vfvgglqpap rcffgvnsea lpasyhpdla
      241 ipwsewlaqf dqdmgqqgrq valllasgvv eewasppglh hvrllplsts sttpslpgsv
      301 vlafkahyrh rllsklaamq sgkegtsrae aranitvlda lhmvaaawak vprqliltsf
      361 iqeglapgkt plsldkdtem spvpsglsqe efshfvdled edpgprvcke etstedngre
      421 edgfeslptk adalralctl rrwlecnsts pelfekfydc eveveqlccl
//
