LOCUS       XP_017452198             683 aa            linear   ROD 22-FEB-2024
DEFINITION  TIR domain-containing adapter molecule 1 [Rattus norvegicus].
ACCESSION   XP_017452198
VERSION     XP_017452198.1
DBLINK      BioProject: PRJNA1074393
DBSOURCE    REFSEQ: accession XM_017596709.3
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086027) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jul 12, 2024 this sequence was replaced by
            NP_001418256.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     Protein         1..683
                     /product="TIR domain-containing adapter molecule 1"
                     /calculated_mol_wt=73911
     Region          1..147
                     /region_name="TRIF-NTD"
                     /note="TRIF N-terminal domain; pfam17798"
                     /db_xref="CDD:436052"
     Region          378..495
                     /region_name="TIR_2"
                     /note="TIR domain; pfam13676"
                     /db_xref="CDD:463954"
     Region          635..654
                     /region_name="RHIM"
                     /note="RIP homotypic interaction motif; pfam12721"
                     /db_xref="CDD:463679"
     CDS             1..683
                     /gene="Ticam1"
                     /coded_by="XM_017596709.3:1589..3640"
                     /db_xref="GeneID:363328"
                     /db_xref="RGD:1590868"
ORIGIN      
        1 mtnpapslhs vfgilsaler drltclkhkl gslhpgsles kllhamvlla lgqdtearvs
       61 leslkvntaa qlvagqwadm entedpeepp dlswtvarly hllaeenlcp astrdvayqv
      121 alrdltsqgd hqlgqlqkea wdrcsshqgs lqppsaapam trsqprpidt sdwswghtlh
      181 stgstatlas hleisqsptl affsshhgah gpsklcdkpl gtqepqlvpe gceepdrsqp
      241 ppvqtsislg lpheirvpev alpilpdsla apntsvhcpi ectevsadsr spltsitesv
      301 gkqwpitsqr spqfpvgddv lpnsmssspp aqppssqass vqpplssass qsscpappas
      361 tppvsehlet sdqkfynfvv iharadehva lrirekletl gvpdgatfce efqvpgrgel
      421 hclqdaidhs gfmillltas fdcplslhqv nhalmnsltq sgrqdcvipl lplecsqaql
      481 spdttrllhs ivwldehspi farkvantfk aqklqaqrer wkkeqeartl keqstqleae
      541 rqrvaaisaa ysayvhgyta wqtemnrlgv afgkdlslgp ptpfpswpgf pkpmpshpqg
      601 ctpvspyspr qppssslsqs fspasspapq tpgpqpliih haqmvqlgvn nhmwghtgaq
      661 ssddktefge tldgpsdrge pls
//
