LOCUS       NM_001025035            2695 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus threonine synthase-like 1 (Thnsl1), mRNA.
ACCESSION   NM_001025035 XM_574089
VERSION     NM_001025035.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   3  (bases 1 to 2695)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC091213.1.
            
            On Jun 25, 2005 this sequence version replaced XM_574089.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091213.1, CV102533.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132262, SAMD00132266
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17q12.3"
     gene            1..2695
                     /gene="Thnsl1"
                     /note="threonine synthase-like 1"
                     /db_xref="GeneID:498805"
                     /db_xref="RGD:1564213"
     exon            1..103
                     /gene="Thnsl1"
                     /inference="alignment:Splign:2.1.0"
     exon            104..162
                     /gene="Thnsl1"
                     /inference="alignment:Splign:2.1.0"
     exon            163..315
                     /gene="Thnsl1"
                     /inference="alignment:Splign:2.1.0"
     exon            316..2671
                     /gene="Thnsl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             361..2598
                     /gene="Thnsl1"
                     /codon_start=1
                     /product="threonine synthase-like 1"
                     /protein_id="NP_001020206.1"
                     /db_xref="GeneID:498805"
                     /db_xref="RGD:1564213"
                     /translation="MLSFTRCHHLKRITQKCFSSALVKVQTPTQLSLPRALACAESGK
                     SWHSTHSLVGDKNIVLMGPPGAGKTTVGRILGDKLGCCVIDVDADVLEKTWNMSVSEK
                     LQDVGNERFLEEEGKAVLNLFASGSVISLSGSNPMHDASMWHLKKNGIVVYLDVPLTD
                     IISRLKSMRVDRIVGRNTGTSLRDLLKHGKLHYRKWYDARVFCESGASAEEVADKVLD
                     VVKRYQDVDSETFISTRHVCLKDHDKKFPPKYFSEAVVEGLASDGGLFVPEKGFPKPS
                     LGEWTNLIGATYIERAQVLLERCIHPADIPAAKLGEMIETAYGESFACSKVAPVRHLS
                     GNQFILELFYGPTGSFKDLSLQLMPHIFAYCIPPGCNYVLLVATSGDTGSAVLNGFSR
                     LNRSDKERIAVLTFFPENGVSDFQRAEIVGSQRENGWAIGVKSDFDFCQAAIRKIFND
                     SDFTGFLTVEYGVVLSSANSINWARLLPQVVYHASAYLELVSQGFISFGSPVDVCIPT
                     GNFGNILAAVYAKMMGIPIRKFICASNQNHVLTDFIKTGHYDLRNRRLAQTFSPSINI
                     LKSSNLERHLYLMANKDGQLMADLYNQLESQLHFQIEELLVEKLQQDFVADWCSEGEC
                     LEAISTTYNTSGYILDPHTAVAKVVADKMQDKSCPVVIASTAHYSKFAPVVLQALRIK
                     ELNQTSASQLYLLSSYNALPPPHEALLERMKQKGKMDYQACVADVDVLKSHVEKLIQS
                     WFREV"
ORIGIN      
        1 cagcagctct ggggcgggtt tgccggctga ggctaccaag gcggtgtcga agtcgcttcc
       61 ctttcccctt tctcttccta ttcttctctg ggtggttttc ttggctttgc tttgctccag
      121 agagtgtatc agactacctg gtgaaattgt ttgtaatttg ggaccctact ttttgcaagt
      181 ttgcctttgc ctcagatcag tacgctcttt gtctggggat cctgttctat tgtgtttcca
      241 cttcagtgag tgaaactgca ccatacaaag ccaaataagg aaatgaagtt tttctcttga
      301 caggccgact tacttggcta aagccagtcc ctggttggct ggtcaggaga gtgaagagaa
      361 atgctgagct ttaccagatg tcaccatctg aagcggataa cacagaagtg cttttctagt
      421 gcactggtta aagtgcagac ccccacacag ctctcgcttc cacgagcctt ggcatgtgca
      481 gaatcaggga agtcatggca ctcgacccac tccctcgttg gagacaagaa tattgtcctg
      541 atggggcctc ctggtgctgg gaaaacaaca gtcggcagaa tattaggtga caaactaggc
      601 tgctgtgtca tcgatgtgga tgctgatgtc cttgagaaaa cctggaatat gagcgtgtct
      661 gaaaaattgc aggatgttgg taatgagcga tttttagaag aggaaggaaa agcagtgtta
      721 aacttgtttg catctggaag tgtgatttcc ctcagtgggt ccaatcccat gcatgatgct
      781 agcatgtggc atctgaagaa aaatgggatt gtcgtatacc tggatgtgcc tctaacagat
      841 ataattagtc gtctgaagtc aatgagagtt gataggattg ttggccggaa cactggcacg
      901 tctctgagag acttgctgaa gcatgggaaa ctgcactata ggaagtggta cgatgcccga
      961 gtcttctgtg agagtggggc ctcagctgag gaggttgccg acaaagtgct tgatgtggtt
     1021 aaaagatacc aagatgtgga ctcagagacg ttcatttcaa caaggcatgt ttgtcttaaa
     1081 gaccacgaca agaagtttcc accaaaatac ttcagtgaag ctgtggttga gggattagct
     1141 tctgatggtg gcctctttgt tcccgagaag ggatttccca aaccaagcct cggggagtgg
     1201 actaacctca taggggcaac ctacatcgaa agagcacagg tgctgttgga aaggtgcatt
     1261 caccctgcgg acattcctgc tgccaaatta ggagaaatga ttgaaactgc ttatggggaa
     1321 agctttgcct gctccaaagt tgcccctgtc aggcaccttt ctggcaatca gttcatcctg
     1381 gagttgttct atggcccgac gggctccttt aaagatttgt ctttacagct tatgcctcat
     1441 atttttgcct actgtatccc tccaggctgc aactatgtgc tgcttgtagc tacttcagga
     1501 gacactggga gtgccgtcct aaatgggttt agccggctta acagaagtga taaagaaagg
     1561 atagctgtgc tcacgttctt tccagagaat ggcgttagtg atttccagag agcagagata
     1621 gttggaagtc agagagaaaa tggatgggca ataggtgtca agtcagattt tgatttttgc
     1681 caggcagcta ttagaaaaat atttaatgat tctgatttta ctggctttct gactgtggaa
     1741 tacggcgtgg tcttaagttc agcgaactct ataaattggg ctcgactact cccgcaggta
     1801 gtgtaccatg cctccgcata ccttgagctc gttagccaag ggtttatttc ttttggaagc
     1861 ccagtcgatg tctgtatccc cacaggaaac tttggaaaca tattagcagc agtgtatgcc
     1921 aagatgatgg gaattcctat tcgaaaattt atctgtgcct ctaatcagaa ccacgttctg
     1981 actgatttca taaaaactgg acattatgat ctaagaaata ggagattagc acaaaccttc
     2041 tcaccatcaa taaacattct caagtcctca aacctggagc gacatttata cttgatggct
     2101 aacaaagacg ggcagttgat ggcggattta tataatcagc tggagagcca gcttcacttc
     2161 cagattgagg agctgctagt tgagaagctg cagcaggatt ttgttgctga ctggtgttct
     2221 gagggcgaat gcctagaggc tatcagcact acctacaaca catcgggcta tattttggat
     2281 ccacataccg ctgttgcaaa agtggttgca gacaagatgc aagacaaaag ctgccccgtg
     2341 gtcatcgcat cgacagctca ctactccaag tttgcacctg tcgtcctgca ggcactgagg
     2401 atcaaagaac tcaaccagac gtcggcaagc cagctctacc tcctgagctc gtacaatgcg
     2461 ttaccacctc ctcatgaggc tctattagag agaatgaagc agaaggggaa gatggattac
     2521 caggcttgtg tagctgatgt ggatgtcctg aagagtcatg tggaaaaact catccaaagt
     2581 tggtttaggg aagtctgagt agggttgttt tctttttttt ttttcttggt aaggagcaat
     2641 aataaatctc gaaagtggat ttggactaca aaaaaaaaaa aaaaaaaaaa aaaaa
//
