LOCUS       XM_003750754            2333 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus thymocyte selection associated family
            member 3 (Themis3), mRNA.
ACCESSION   XM_003750754
VERSION     XM_003750754.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003750754.5.
            
            On Jan 21, 2021 this sequence version replaced XM_003750754.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2333
                     /gene="Themis3"
                     /note="thymocyte selection associated family member 3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein, and 89% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:689599"
                     /db_xref="RGD:1591029"
     CDS             1..1722
                     /gene="Themis3"
                     /codon_start=1
                     /product="protein THEMIS3"
                     /protein_id="XP_003750802.1"
                     /db_xref="GeneID:689599"
                     /db_xref="RGD:1591029"
                     /translation="MEQTWDSYINSLNRNSLPRQVEVTEGNYFSGSLENLSFSKGDVI
                     TVVDLEPILVRAEVKDGERVLDLVDIPLGYEGNFQLVADPVSFETVADLIHSVRLPQN
                     PVAHRSPPRFQNLIPISTDDVPMKLRKGETLSLIGFEESQGRRLLRCEVLRKTPPLKL
                     LLPMDCRGHFLECQDDQLYSIDTIVRWKLLAGRKRRVRVQAGHRLRLLSPLVPEHFRG
                     HLVLHPYFSVMAYLPGETQVSIPSDLDISVTEITGLDRKPRTTMRQIFSMEENKFPVR
                     IKITSVVLTENEVCPKPLKCGQLLTILRTENVRKFVATEISQGKKGRRFLIPYTYQGL
                     VHRRGRYFYAVSDVAAAMQHGQVYFQASRDYTSFLGPSASFEADECFLALKKTVVFAK
                     FHSELHRVKVLKCLNIATKDQVKLPLFAVGEFLELFDGAGPGTLQELCQVTKLPCHVS
                     VASPDPSVTEEEEDPLYGTEELRIENVVVERCLIAKDEPSLEDMIASGDIYRECPEAT
                     FAIPIEKSSFEVSVVEEPSWIADVEKEKCTPLQSIQEVTEKSLAFSNCLVIPRPPPLA
                     PKPRSLF"
ORIGIN      
        1 atggagcaaa cttgggattc ttacatcaat tccttaaatc ggaactcctt acccagacaa
       61 gtggaggtga ccgagggaaa ctatttttca gggtccctcg aaaacctgtc gttttccaaa
      121 ggggatgtca tcacggtggt tgacctggaa ccgattcttg tcagagcaga agtgaaggac
      181 ggtgagcgag ttctggactt ggtcgatata cctctcggat acgaagggaa cttccaactg
      241 gttgcagacc cggtttcttt tgaaactgtg gctgatttaa tccattctgt ccgacttccc
      301 cagaatcctg tggcccacag aagtcctccc cgcttccaga acttaatccc catctccaca
      361 gatgatgtgc ccatgaagct caggaaagga gaaacactgt ccttaattgg ctttgaagag
      421 agtcagggga ggaggctgct acgatgcgag gtgctgagga agacgccccc cctgaaactg
      481 ctcctcccca tggactgcag gggccacttc ctggagtgcc aggatgacca gctctactcc
      541 attgacacca tcgtgaggtg gaagctgctt gcagggagga agcgcagggt tagggtgcaa
      601 gctggacatc gcctgaggct tcttagcccc ctggttccag agcactttcg tggacattta
      661 gttttgcatc cctatttctc agtgatggca tatctgccag gtgagaccca ggttagcatc
      721 ccctccgatc tggacatcag tgtaactgag atcaccggct tagatcgtaa gcccaggaca
      781 acaatgaggc aaatattcag catggaagaa aacaagttcc cagtgagaat caaaataact
      841 agcgtggtcc tgacggagaa cgaggtgtgc ccaaagcctc tgaagtgtgg gcagctctta
      901 accatcctca ggacagagaa tgtgaggaaa ttcgttgcca ctgagatttc ccaaggaaag
      961 aaagggaggc gttttctcat cccgtacacc tatcagggcc tggtacatag gagaggtcgt
     1021 tacttttatg ctgtctctga tgtcgctgct gccatgcaac acggacaggt ctacttccag
     1081 gcctccaggg actacacctc cttcctgggg ccttccgcat ctttcgaagc cgacgagtgc
     1141 ttcctggccc tgaagaagac tgtggtgttc gccaagtttc acagtgagct gcacagggtg
     1201 aaagtcctca agtgcctgaa cattgccacc aaagaccagg tcaaactgcc tttgttcgca
     1261 gtaggagagt tcctggagct gttcgatggc gctggaccag ggaccctgca ggagctatgc
     1321 caagtcacaa aactgccgtg ccacgtcagc gtagccagcc cagatccctc cgtgactgag
     1381 gaggaggagg accccctgta cggaactgag gagctgagaa ttgaaaatgt cgtcgttgaa
     1441 cgatgcctca tagccaaaga tgaaccgtca ctggaggaca tgatcgcctc aggagacata
     1501 tacagggagt gtccagaagc cacatttgca atcccgattg agaagtcaag cttcgaggtc
     1561 tcagtggtag aagagccttc ctggatagct gatgtcgaga aagagaaatg cacgcctctc
     1621 cagagcatcc aggaagtcac cgaaaagtct ctggccttca gtaattgctt ggttatcccc
     1681 cgtcctccgc cacttgctcc aaagcccaga agtctgtttt aaaaacagaa aaacgtgact
     1741 gtcatccctt cctttgttta cagaatcatc agctgaatgt ttggagtttt ccagagctga
     1801 aagggagccc ccagaggtgg gagcccggat cacaggtgtc aacaagacac tatttccatc
     1861 acccctgaac atttgctata agatgtgtta ttgttctgtc actgtgacaa aatgcttgag
     1921 ataatcaact catgaggaga aaaggttcct tttgggctca gagacttcag tccgtgatca
     1981 cttggcccca ctgcctttgg gcctgtggca tggcgactca tcgtggtggg gacatgcagt
     2041 ggatcaaagc tgcccacctc accattggca ggaagcagaa aggttcctat agctctttct
     2101 gtatgtcccc aggaaaataa ctcccttcac caaggcatca acctttaatg gttccatgat
     2161 ctcccaaaag cactgtgcac tagagaccaa gcttttgggg gactcctatt aaaaccatct
     2221 gtactggttg tagttttgtg tgtccacttg acacaagctg gagttatcac agagaaagga
     2281 gcctcccttg aggaaatgtc tccatgagat ccagctgtaa ggcattttct caa
//
