LOCUS       XM_039102694            1914 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus thioesterase superfamily member 4
            (Them4), transcript variant X2, mRNA.
ACCESSION   XM_039102694
VERSION     XM_039102694.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039102694.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1914
                     /gene="Them4"
                     /gene_synonym="RGD1304723"
                     /note="thioesterase superfamily member 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 2 long SRA reads, and 98% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     94 samples with support for all annotated introns"
                     /db_xref="GeneID:361992"
                     /db_xref="RGD:1304723"
     CDS             435..962
                     /gene="Them4"
                     /gene_synonym="RGD1304723"
                     /codon_start=1
                     /product="acyl-coenzyme A thioesterase THEM4 isoform X1"
                     /protein_id="XP_038958622.1"
                     /db_xref="GeneID:361992"
                     /db_xref="RGD:1304723"
                     /translation="MKKCEDGSWKRLPSYRQNPPQALQEFQTHFVDSKFKKEEQMSKA
                     QQFTRSLEEGLGFEYAMFYNKAEKRIVCLFQGGLHLQGMPGFVHGGAIATIIDITAGM
                     CAFSEGIVMTANLNIDYKKPIPLLSVVVVNSQLQKIEGRKLFVSCTIQSTDEKTLHTQ
                     ATALFIKLDPDKPLT"
ORIGIN      
        1 ggcggcctga agcaacgagg gtgagtccca ggactctgct ttcgtggggc gagatgggag
       61 actccccgac cgaagctaaa ctaatacctg ctccgggttg ttacggggct cacgggatct
      121 tcagccctga gattcgaatc aggaggagcc ggaagggaag tgactcgaag ttgaaatagg
      181 tcagcaggga tcgccactac tatttctgag atattaagaa aggttaaaca aggtcaccca
      241 gaaaaccatg aaagagccat tacggaccct tgagaccact tatccttagc agggatctaa
      301 tcctggtgga ccctgattcg ttataaccaa ttcaggaaga gaggttattt tcttctgagg
      361 aagtcgtctg taaggactat gctctcccta accccagctg gactaaggac ctaagactcc
      421 tttttgacca gttcatgaag aaatgtgaag atggctcctg gaaacgtttg ccttcataca
      481 gacaaaaccc tcctcaagcc cttcaagagt tccaaaccca ctttgttgac tcaaagttta
      541 agaaagaaga acaaatgtca aaggcacaac agttcaccag aagcttagaa gaaggactag
      601 gctttgagta cgcgatgttc tataataagg ctgagaagag aattgtctgc ttgtttcaag
      661 gaggtcttca cctgcaagga atgcctggat ttgttcatgg aggtgccatt gcaaccatca
      721 tcgacatcac tgccggcatg tgtgcatttt ctgagggcat tgtcatgact gccaatctca
      781 acatcgacta taaaaaacct atcccccttc tttctgttgt tgtggtaaat agccaacttc
      841 aaaaaattga aggaaggaaa ctttttgttt cctgtactat tcaaagtact gatgagaaga
      901 ctttacatac acaggcaaca gccttattta taaagctgga tcctgacaaa cctttgacat
      961 aaaagaactc tggtgagttc cacaccgttc tgcatgaggt ccccgccccc tccagaagta
     1021 gcacctatct ccactcctgt cacagctgct gaatccccca gggaaagtct gctctcacag
     1081 ctccttcagc gcagcctctg acgtggctgc aggaactcac tctcaccttc cagagttatc
     1141 ataagaagta ctgcccgggg gcgtctcagc agtaatctgt atgtccacgt gacaactgtg
     1201 tggttctaac tcgtgaacag acttcaaagc taacaagcat aggacctgct ctgctgtggg
     1261 ctgcagaaaa aaacaaaaga ccatattgag acttgggctg caaatgtgga aatgcacgaa
     1321 aaccacaggc agggatagat ccacagagcg ttgagtgacg tgcgtgtgtg cacaagccgc
     1381 gccgggtctt acagaactaa gtttgttgta tctgaacaaa ctctctttgg ccacatcagg
     1441 aacacagctc attgctgtgg gaatggcccc cacacatcat tgtctggggc cctagagatt
     1501 aaaatactgt tcatttttct ggcctgtgct gctgtagctt agaacactgt agtctgtcac
     1561 ccctggaaga aggctttgtt acatttctgg gactgtaatg aagagctaca agctgggtgg
     1621 tttaaacaaa taaaaaacgt cactggcaca gccccagggg ccagcagtct aaaagtatta
     1681 acaaaacgtt gcttcttaag gttctgggcg ggcactttca catctctcct ggcttctacc
     1741 aaggaagcat ccagctttcc ttggttttta gacacagcat aattcctaat tgcatctctt
     1801 ttatcatctt ctctcggttg tatccacatt tccctttgtg aatgtttatt tatttatttg
     1861 tctgggtggg tgtgtgtgtt caggtgctaa aataaattgg gagattagtg ttct
//
