LOCUS       NM_001107209             796 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus THAP domain containing 6 (Thap6), mRNA.
ACCESSION   NM_001107209 XM_001071562 XM_223245
VERSION     NM_001107209.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FM098768.1 and CK602350.1.
            
            On Sep 10, 2009 this sequence version replaced NM_001107209.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM098768.1, SRR8487230.6407.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-183               FM098768.1         1-183
            184-796             CK602350.1         83-695
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..796
                     /gene="Thap6"
                     /note="THAP domain containing 6"
                     /db_xref="GeneID:305244"
                     /db_xref="RGD:1310094"
     exon            1..66
                     /gene="Thap6"
                     /inference="alignment:Splign:2.1.0"
     exon            67..167
                     /gene="Thap6"
                     /inference="alignment:Splign:2.1.0"
     CDS             88..738
                     /gene="Thap6"
                     /codon_start=1
                     /product="THAP domain-containing protein 6"
                     /protein_id="NP_001100679.1"
                     /db_xref="GeneID:305244"
                     /db_xref="RGD:1310094"
                     /translation="MVKCCSAIGCASRCLPNSKLKGLTFHVFPTDENIKRKWVLAMKR
                     LDVNTAGIWEPKKGDVLCSRHFKKTDFDRSTPNTKLKPGAIPSVFESPCHLQEKREKL
                     HCRKNFILKTLPVSNRGHQLVGASCIAEFQPQLIFEHSYSVMDSPKKLKHKLDLVIIE
                     LENTKESLQNVLDREKHFQKSLRKTIRELKDESLISQETASRLDAFCWECCQESTA"
     exon            168..375
                     /gene="Thap6"
                     /inference="alignment:Splign:2.1.0"
     exon            376..498
                     /gene="Thap6"
                     /inference="alignment:Splign:2.1.0"
     exon            499..796
                     /gene="Thap6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggggcgaaa gccaagtgag acgcttattc cgtcgtcgac gttagtcgct gtcgtcgctg
       61 ctaacgtttt gttatgttgc taaaatcatg gtgaaatgtt gctcggccat tggatgtgct
      121 tctcgctgtt tgccaaattc caagttaaaa ggactgacat ttcatgtatt ccccacagat
      181 gaaaacatca aaagaaaatg ggtgttagcc atgaaaagac tagatgtgaa tactgcaggc
      241 atttgggagc ccaaaaaagg agatgtgctg tgctcgaggc acttcaagaa gacagacttt
      301 gacagaagca ctccaaacac taagctgaaa ccaggagcca tcccttctgt ctttgagtct
      361 ccctgtcact tacaggagaa aagagaaaag cttcattgta gaaaaaactt cattctcaaa
      421 acccttcctg tcagtaaccg tggccaccag cttgttggcg cctcatgcat tgcagaattc
      481 caaccccagc tcatttttga acatagctac agtgttatgg acagtccaaa gaaacttaag
      541 cataaattag atcttgtgat catcgagcta gagaatacca aggaaagtct acagaatgtt
      601 ttggaccgag aaaaacattt tcagaaatca ttgaggaaga caatcaggga attaaaggat
      661 gaaagtctga tcagccagga aacagccagt agactggatg ctttctgttg ggagtgttgt
      721 caggaaagca cagcttgaga cgactgaata tgccccatct gcaacggaca tgataacgct
      781 tcttagaagc ctctcc
//
