LOCUS       NM_001394993            4634 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus THAP domain containing 2 (Thap2), mRNA.
ACCESSION   NM_001394993
VERSION     NM_001394993.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4634)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000007.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.171537.1,
                                           SRR26360176.1242509.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-213               JAXUCZ010000007.1  52893468-52893680   c
            214-409             JAXUCZ010000007.1  52886115-52886310   c
            410-4634            JAXUCZ010000007.1  52879011-52883235   c
FEATURES             Location/Qualifiers
     source          1..4634
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q22"
     gene            1..4634
                     /gene="Thap2"
                     /note="THAP domain containing 2"
                     /db_xref="GeneID:688019"
                     /db_xref="RGD:1593643"
     exon            1..213
                     /gene="Thap2"
                     /inference="alignment:Splign:2.1.0"
     CDS             143..796
                     /gene="Thap2"
                     /note="THAP domain containing, apoptosis associated
                     protein 2"
                     /codon_start=1
                     /product="THAP domain-containing protein 2"
                     /protein_id="NP_001381922.1"
                     /db_xref="GeneID:688019"
                     /db_xref="RGD:1593643"
                     /translation="MPTNCAAAGCAATYNKHINISFHRFPLDPKRRKEWVRLVRRKNF
                     VPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFCTHIKSLKLKSRNLLKKSNS
                     FTSAGPCNLKLNSSQQVLLEHSYAFRSPVEAKKRIIKLEREIASLRRKMKTCLQRERR
                     ATRRWIKATCFVKSLEAGNMLPKGISEQILPTALSSLPLENLKILQQDQQDKTLPVL"
     exon            214..409
                     /gene="Thap2"
                     /inference="alignment:Splign:2.1.0"
     exon            410..4634
                     /gene="Thap2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggtactgtg cacgcccctc ttcccacccc gctctctgcg cggagcttgt cgcctgcctc
       61 gtttgtctag cgtttgacag aagcttagcg ggcagcgcct cagaactggc gtaaggtagc
      121 gccgaatgag gggccggggg aaatgccgac caattgcgcc gcggcgggct gtgctgctac
      181 ctacaacaag cacattaaca tcagcttcca caggtttcct ttggatccca aaagaagaaa
      241 agaatgggtt cgcctggtta ggcgcaaaaa ctttgtgcca gggaaacaca cttttctttg
      301 ctcaaagcac tttgaagcct cctgttttga cctaacagga caaactcgaa gacttaaaat
      361 ggatgctgtt ccaaccattt ttgatttttg tacccatata aagtctctga aactcaagtc
      421 aaggaatcta ctgaagaaaa gcaacagttt tacttcagcc ggaccatgta atttaaagct
      481 gaatagtagt caacaagtac tgctcgaaca cagctatgcc ttcaggagcc ctgtggaggc
      541 gaagaagagg ataattaaac tagaaagaga aatagcaagc ctgagaagaa aaatgaaaac
      601 ttgcctgcaa agagaacgca gagcgactcg aagatggatc aaagccacat gctttgtgaa
      661 gagtttagaa gcaggcaaca tgctacctaa gggcatctca gaacagattt tgccaaccgc
      721 cttaagcagt cttcctttgg aaaatttaaa aattcttcaa caagatcagc aagataaaac
      781 attaccagtt ctctaaatgt aagatagaca agaatatctg cacttaagtt ttccttacac
      841 aggacccaat gcctatctcc tgccgtcgcc aaccatactc gggctattac actacaatca
      901 agtgcttaag ttttacttga agtagcaata tcactggtgg agacctgaga aagtgtcagt
      961 gacaagtttg ggaatgagaa gaagtgcctt acatgaggat tatgtactta gacttcattg
     1021 tcctaggaaa ccctgttaga ggttgtttct ggttgtgttc ctttaagcta atagggatga
     1081 caaatgatat gttcctacaa gtgaaggcat tccgcaccaa agctgggcta gtacattcaa
     1141 aagaacatgt caagtaggag ctagtcacgt taaacatgag ctgaaactac tggactttct
     1201 atgaattaaa ttattgggat agtggttgaa aatttgtaga ctaaaacctc tggggtacag
     1261 ggcaagggtt tttttctttc tttctttttt agccttttgt attttaacca gtgaaagtaa
     1321 gcttatcatg gccttcctta taagaacatt ggatttaaaa gtaggttgta aaataatttg
     1381 aaaatagcat tttgaatgtg aaataccttt gagactccaa actaaggcaa ggcctcaagt
     1441 acctcagact gggaaaagct ggtgagttat atttaacttc taagaaaata cacaggaaat
     1501 aatgcagaat ctgaagtcta gcttttacct tgatgaacta aataggcaaa tgcatactat
     1561 tctttttctt ataatagaaa tattgaattt ccaaattcac agttgataca ttgataaaca
     1621 cttttagacc atttgttctt tgtgttgata gcaaattctt aagctggtga ttcttttcgt
     1681 gactactact tagttgtctt tttatgtcaa aaatagcgtc tgccctttaa taaatcgcag
     1741 tataatttaa tcacagggaa gtacttacta tgctgtgttt cagacccagg acaagcagct
     1801 gaggaacata tttagcacat caaggtgagg ctatgaaaac ttctaagaag gtatctgaga
     1861 gcctaagaag gtgttaggag gttgggaagt tgagcataga ggctgcggta tgccatccat
     1921 gcctggtaac agacagagac tggggatctg agtggagccc aggtccactt tggtatacta
     1981 aatatgcacc tcagccactt gtcctggctc cgaaacccaa cagtgctacg ttaaaacaga
     2041 ctcagttttt cttacccatc agcttgcttt ttaacattct ttttttagaa aatcaaaact
     2101 ttaattcata atggaagtaa aatacagtcc tctaaaataa tgtgtctctg tgataaagct
     2161 atgcaaatac tgatatttat aaaacagaaa tatcgagatg gctcttctgg taccacttgt
     2221 accttgaaaa ggccttattg tcactaactg tctaataaaa gggccctccc ttcaaaataa
     2281 gagcccttcc ttcaaattca aagcccttcc ttcaaagagc tttggctaag gaagtgcatt
     2341 cacataagtt atttagttct tccagtttgt gagatcacca taagaatgta acatgcctga
     2401 tcgcaaataa ctgtaaatct ttcctacaca gagatgggat ttggactctc tgtcatctct
     2461 tgagctgttt ctgtctgtcc tgccaagtta tcagcactgt ttagtaagga ccatgtttcc
     2521 tgcaaacaca gtggatggct gtcttagttt ctgtgtgatg cttataacca atactctgta
     2581 agttctttta tagatgtgat catccttgtt agctatctta agtattgggt aaagttcctt
     2641 aaacttgtca tcgtatagtt tttcctaatg ctggttcatg tgtctttata ttatgtcaac
     2701 tatcaactgc aaacacactg actagtacct acttggtagc ctaaaataag cggggcaact
     2761 tatcatatta acataaccta tgttctcaaa atgtaaactt tcgtatggct tcccatgttc
     2821 gccaagcact aattaatgtg gtctggttag ggttaatact tgatatttaa tacactttta
     2881 aatcataaat gtacagcatt gtaaaacaca atgcactttt ggcaaagttg catatcttca
     2941 ctcattatta tcagccttta gtttctttgg ggtgttttgt ttgtgtgctg gaaattgaac
     3001 ccagggcttc ctgcatgcat acgcccctgc tgagccagat ccccagtctt ttacagtcac
     3061 tatttttgga cttcattgaa taaacaatcc tcagtaaatg taattttctt cctattttct
     3121 tcatgttgtt tttcctggta acatgcttca aagtgtcttt acatgactgt attaataaca
     3181 cacctgtctg cctttaaaat agcttcctag ctgaacatgc taacacatat ccgtcaggct
     3241 agaatggaag gagaaggaag agaaggtggg gaaaagtgaa ttccaagctt ttaaaaacag
     3301 tctaggagtc ttaaaatcct gccttcagtt tgctgataga ttttagtttt tttttttttt
     3361 ttagttgact gcatagtgta aaactgatgg tgaggtgtga tgaagcccag agacaaatgt
     3421 tctctaggct tcagaggaat ggggagtggg cccaaaactt gagccagccc aggctatttg
     3481 agtccttctt tgggaaataa accaatcaga attaccacag ctctcgacag tcatgcatgc
     3541 ctcacagatc ttctatctat ccagtgtgtc tacaagctgc taacatccac aaagaaaaag
     3601 ctaagaatga aaacaactga aggttaggaa cttacttgat aggaaggcaa gtactggact
     3661 gggagatgtg acccgttcag catgcatcaa gtccaaggtt caaactccaa cacccaaagg
     3721 ggttagatat gacattctct gcccttctgt tgctgcaagc ctcctgaaag aacggtgctt
     3781 gaatacgagg tgaattctgt gaaagaagta ggtgtaagat gcttcagtac atactgtgga
     3841 ctggaaactc aatgggaaaa tgtagaaact tcagacttac ttacaaccaa gtgactctct
     3901 tttgaaataa aatggatttc tcttaaaatg actggtgaga ggtaggcaga acactaggct
     3961 ttggcctgag ttcagtgttt ctgggtccta accctttaaa atacacacac acacacactg
     4021 aacagatcga aatgataact ttgccaaaag gtcaaagctg agaactagaa tatttggaat
     4081 ttggtatttt ggggaaaaaa taatgctatt gacaggattc tgaactaact catgaaacag
     4141 ttgtttttca gtctctgcct ttctccttgc aagctggatt cacacaagaa ggtacctctg
     4201 tttattctct cgcacactac tctgtcccac ttgcagagat gtgaatgcct gaggtctaca
     4261 cagtctcgga tgaacacgtg tcttctaccc tccagttctc tttttaatat gttattaaat
     4321 taggaaaaat catgcgtttt agaaaagcag aggataaact ttaactgtac taaagttgtt
     4381 tgagatactt gctcatggtg tgtatggaga ttttgttgtg ttctctcatt tctcagtgtt
     4441 agaaaacggg tacgttttta ttttgatatg atagagaaac taaactttat atcaggaggg
     4501 gattcttttg atatttatac agtcgaatac tttacaaagt taaggatttt gtaatgtctt
     4561 attaaaccat aacattgtac tcacaaaaaa agtatttgga atttgttact attaaaaagt
     4621 tgtttcccat ggaa
//
