LOCUS       XM_008762241            2342 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transglutaminase 7 (Tgm7), partial
            mRNA.
ACCESSION   XM_008762241
VERSION     XM_008762241.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008762241.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008762241.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..2342
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..2342
                     /gene="Tgm7"
                     /note="transglutaminase 7; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 1 EST, 10 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:102552199"
                     /db_xref="RGD:7615199"
     CDS             <1..2142
                     /gene="Tgm7"
                     /codon_start=1
                     /product="protein-glutamine gamma-glutamyltransferase Z"
                     /protein_id="XP_008760463.3"
                     /db_xref="GeneID:102552199"
                     /db_xref="RGD:7615199"
                     /translation="PVLPPQVAALELRSVELQIPRNNKDHHTQDLGSSKLILRRGQIF
                     ILTIVFSRPFQPQKDHLTFVAETGPEPTELLGTRATFFLVQTRPENVWSASDFVIDSN
                     SLQVSIFSPASAVIGHYTLKLEISRDQGPGVTYPLGNFILLFNPWSTEDDVYLPSEAL
                     LREYIMCDYGFVYKGQANSITSRPWNYGQFEEDIVDICFEILNKSLYFLKNPSKDHSQ
                     RNDVVYVCRVVSAMINSNDDSGVLQGNWGEDYSQGTSPLEWNGSVAILRQWSARGGQP
                     VKYGQCWVFASVMCTVMRCLGVPTRVVSNFHSAHNTDGNLTIDTYYDRTAEMLPAQRP
                     DKIWNFHVWNECWMIRKDLPPGYNGWQVLDPTPQQTSSGLFCCGPASVKAIKEGDVQL
                     PYDTPFVYAEVNADEVVWLFEGGQVQEILAHNISYIGKAISTKMVGSDERLDITSSYK
                     YPEGSSEERSVFIKASWKLLEPRRNSSSLLDLLGSENFKDKPVQLQLHLARAPMWGQD
                     VLLMLLVRRVPVRDHVQGPVGLTVRFCAQALLHGGGTRKPFWRHVVHLNVDSEKELQW
                     PLLLPYSNYRDKLTDENLIHVSGIAEVEETGQFILVLKEFSLEPPYLSIEVFEKAEVG
                     KALNIHITLTNTLMVPLNNCTMVLEGSGLINGQMTKDLGTLMAGHTIRIQLELYPIKA
                     GRHQLQVLISSSEVKEIKGYKDIFIAAAPAS"
ORIGIN      
        1 cctgtcctcc ctccccaagt ggcagccttg gagctcaggt ctgtggaact gcagatcccc
       61 aggaacaaca aggaccacca cacccaggat ttgggctcat caaagctcat tctgcgccgc
      121 ggccagatct tcatcttaac gatagtcttc agtcgacctt tccagcccca aaaggaccac
      181 ctcacctttg tggctgagac aggaccagaa cccacagagc ttctggggac ccgagctact
      241 ttcttcctcg tccagacccg acctgagaac gtctggagtg cttctgactt cgtgattgac
      301 agcaactctc tccaagtctc cattttctca ccggcgagtg cggtcattgg ccactacaca
      361 ctgaagctag agatctcccg ggaccagggt cctggtgtga cctaccccct ggggaatttc
      421 attttgcttt ttaacccatg gagtacagag gatgatgtct acctgcccag cgaagcactg
      481 ctgcgggagt atatcatgtg tgactatggc tttgtttaca agggtcaagc aaattccatc
      541 acctccaggc cttggaacta cgggcagttt gaagaggaca tcgttgatat ctgctttgag
      601 atcttgaaca agagcctgta ttttctaaag aacccatcca aagaccattc tcagagaaac
      661 gacgtggtgt atgtatgcag ggtggtaagc gctatgatca acagcaatga cgacagtggt
      721 gtgcttcagg ggaactgggg agaggattac tcccagggca ccagccctct ggaatggaat
      781 ggcagcgtgg ccatcttgcg gcagtggtcg gccaggggag gacagcctgt gaaatatgga
      841 cagtgttggg tctttgcctc tgttatgtgc acggtaatga gatgcttagg tgttccaacc
      901 cgagtggttt ccaatttcca ttctgcacac aacaccgatg ggaacttgac catcgacacc
      961 tactatgacc gaactgcaga aatgctgccg gctcagaggc cagacaaaat ctggaacttc
     1021 catgtctgga acgagtgctg gatgatcagg aaagaccttc caccagggta caacggctgg
     1081 caggttctgg accccacgcc ccagcaaacc agcagtggat tgttctgctg tggccctgcc
     1141 tctgtgaaag ccatcaagga aggggacgtc cagctgccct atgatacccc ttttgtatac
     1201 gcggaggtga atgctgatga ggtcgtttgg ctttttgagg gtggccaggt ccaggaaatc
     1261 ctggcccata acatcagcta cattgggaaa gcaatcagca ccaagatggt tgggtcagat
     1321 gagcgcctag acatcaccag ttcctacaag tatccagaag gatcctctga ggagcggtct
     1381 gtgttcatta aggcttcctg gaaattgctg gaaccgagaa ggaactcctc atctctcctg
     1441 gatctcttag ggtctgagaa ctttaaggat aaaccggtgc agctgcaact ccacctggct
     1501 agggcaccca tgtggggcca ggacgtgctg ctcatgctac ttgtccggag ggtgccagtc
     1561 agagaccatg ttcaggggcc tgtcggactg acggtgcgct tttgtgcaca ggccctcctg
     1621 catgggggcg gcactcggaa accgttctgg agacacgtgg tacacttgaa tgtggattct
     1681 gagaaggagc tacagtggcc gctcctgctg ccctacagca attacaggga caagctgaca
     1741 gacgaaaatc tgatccatgt gtctggcatc gctgaggttg aagagacagg gcagttcatt
     1801 ctggtcctaa aagagttctc tctggagcct ccctacttgt ctattgaggt gtttgaaaag
     1861 gctgaggtgg gcaaggccct gaacatccac atcaccctca ccaacaccct aatggtgcct
     1921 ctgaataact gcaccatggt tctggagggg agtggcctca tcaatgggca gatgacaaaa
     1981 gaccttggga ctctgatggc cggacacacc atccgaattc aactggagct ctaccccatc
     2041 aaagctgggc gccaccagct acaagtcctc atcagcagca gtgaggtcaa ggagatcaaa
     2101 ggctacaagg acatcttcat tgcggcagct ccagcctcct gaggcctgcc ttcctaatgc
     2161 cctccccagt ccttgtccca gccctgcttc ccacccccag catagcctca cagctctcta
     2221 cttctcaagg tggttggtgt ctttgttaac ctctgtggtg tgggtaatag aaactctgta
     2281 gaaccactgt gcatcatggg aaaaaacaat aaagatgtgt tcactctctc ctctgctaag
     2341 aa
//
