LOCUS       NM_001134983            2908 bp    mRNA    linear   ROD 14-JUL-2024
DEFINITION  Rattus norvegicus TGFB-induced factor homeobox 2 (Tgif2), mRNA.
ACCESSION   NM_001134983 XM_001067005 XM_575274
VERSION     NM_001134983.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Icardi,L., Mori,R., Gesellchen,V., Eyckerman,S., De Cauwer,L.,
            Verhelst,J., Vercauteren,K., Saelens,X., Meuleman,P.,
            Leroux-Roels,G., De Bosscher,K., Boutros,M. and Tavernier,J.
  TITLE     The Sin3a repressor complex is a master regulator of STAT
            transcriptional activity
  JOURNAL   Proc Natl Acad Sci U S A 109 (30), 12058-12063 (2012)
   PUBMED   22783022
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Powers,S.E., Taniguchi,K., Yen,W., Melhuish,T.A., Shen,J.,
            Walsh,C.A., Sutherland,A.E. and Wotton,D.
  TITLE     Tgif1 and Tgif2 regulate Nodal signaling and are required for
            gastrulation
  JOURNAL   Development 137 (2), 249-259 (2010)
   PUBMED   20040491
REFERENCE   3  (bases 1 to 2908)
  AUTHORS   Satoh,S. and Watanabe,S.
  TITLE     TGIF, a homeodomain transcription factor, regulates retinal
            progenitor cell differentiation
  JOURNAL   Exp Eye Res 87 (6), 571-579 (2008)
   PUBMED   18926818
REFERENCE   4  (bases 1 to 2908)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168719.1.
            
            On or before Sep 16, 2008 this sequence version replaced
            XM_575274.2, XM_001067005.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168719.1, FQ235168.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132292, SAMD00132295
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..2908
                     /gene="Tgif2"
                     /gene_synonym="RGD1560115; RGD1564927; Tgif2l1"
                     /note="TGFB-induced factor homeobox 2"
                     /db_xref="GeneID:499929"
                     /db_xref="RGD:1560115"
     exon            1..184
                     /gene="Tgif2"
                     /gene_synonym="RGD1560115; RGD1564927; Tgif2l1"
                     /inference="alignment:Splign:2.1.0"
     exon            185..410
                     /gene="Tgif2"
                     /gene_synonym="RGD1560115; RGD1564927; Tgif2l1"
                     /inference="alignment:Splign:2.1.0"
     CDS             219..932
                     /gene="Tgif2"
                     /gene_synonym="RGD1560115; RGD1564927; Tgif2l1"
                     /note="TGFB-induced factor homeobox 2-like 1"
                     /codon_start=1
                     /product="homeobox protein TGIF2"
                     /protein_id="NP_001128455.1"
                     /db_xref="GeneID:499929"
                     /db_xref="RGD:1560115"
                     /translation="MSDSDLGEDEGLLSLTGKRKRRGNLPKESVKILRDWLYLHRYNA
                     YPSEQEKLSLSGQTNLSVLQICNWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASD
                     VALPRGSSPSLLAVSVPAPTNMLSLSVCSMPLHSGQGEKPAASFPQVELESPKALVTP
                     GSTLTLLTRAEAGSPTGGLFNTPPPTPPEQDKDDFSSFQLLVEVALQRAAEMELQKQQ
                     DPAPPLLHTPLPLVSENAK"
     exon            411..2885
                     /gene="Tgif2"
                     /gene_synonym="RGD1560115; RGD1564927; Tgif2l1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggcgggcg cgatgggagg agaggggatc tgacgtcagg tcgcgaggtg ctttccagcc
       61 gcgagctgtc aggcgggtgt cagacccggc aggtacccgg cgcgttcccc ctgcgccccc
      121 ccgtcccggc ccggtcgtcc ctcaccccac agaggccgcg tgggccggaa agccgccggg
      181 gaaggctgcc cagaggtcca gcttagtccc caagcaccat gtcggacagc gatctaggcg
      241 aggatgaagg tcttctgtca ctgactggca agaggaagcg cagggggaac ctgcccaagg
      301 agtcagtaaa gattctccga gactggctgt atctgcaccg ctacaacgcc tacccctctg
      361 agcaggagaa gctaagcctc tctggacaga ccaacctctc cgtgctgcag atatgtaact
      421 ggttcatcaa tgcccgccgc cgccttctcc ctgacatgct tcggaaggat ggcaaagacc
      481 ctaatcagtt caccatctcc cggcgcgggg gtaaggcctc agatgtggct ctccccaggg
      541 gcagcagccc ctctctgctg gctgtgtctg ttccagcccc caccaacatg ctctccttgt
      601 ctgtgtgttc catgccactc cactcaggcc aaggtgaaaa gccagcagcg tccttcccac
      661 aagtggagct ggagtccccc aaggccctgg tgacccctgg gagcacactc accctgctga
      721 ctagggcaga ggctggaagc cccacaggtg gactcttcaa tacgccacca cccacacccc
      781 cagagcagga caaggacgac ttcagcagct tccagttgct ggtggaggtg gcgctgcaga
      841 gggctgctga gatggagctt cagaagcagc aagatccagc gccaccctta ctacacactc
      901 cgctccctct agtctcagaa aatgccaagt aggcactgct cccaggcggc ttgaggtcca
      961 ggccagctgt cccaggtttc tggttcactt ccctttcata cagagggtta tctatgtacg
     1021 gatcactgcc gagcatcagg atcatctgtc cagcgggcct cagcagaaag aggccactga
     1081 tgtcgctgca ctgcaccggt aacagggcct gtactctgct gagtgccatt ccttcaagcg
     1141 tcctctccga ggagaccaag gcaccagagc caggtgtggt gctgctgctg ctgcttctcc
     1201 agagagccct gggacacctg cactccagcc tgctttctga cgcaggctca ggaaacctgc
     1261 caagttcaga cttgagctgg gtccaagccg cccctaagct gtgcctcttg gtcgagccag
     1321 gtgcacacat tccagcctat tcaaaggaca aaggaaaatg cccagcagat gtcacagaac
     1381 cgactccagt tgaatgttta gatttttgct aaattgtttt attttccttt tgctgtggtt
     1441 tgtgttaatg gcagtaggta gcccagaagc acaggtgtgg ggagagagca ccttacgtga
     1501 tggatggggc ttgatgaatg gggtaatcta cggctgctca ggatgactgt ataagggacc
     1561 agcagattct ctatagtgct gaattcagac tatggtgatt gtttaagtct tggtttggtt
     1621 taccctgtta taaaagacag aaggaaaata tccacaggtg gtggattatt tgcaccagac
     1681 acaggcgggg aataaagcca caaccaagtc caagcaaacc agacagccat ttagacacag
     1741 cagagacaga tgataaagtc agagacacac ttgtttctat tgtagtttgg ggtggttaag
     1801 ctagactgaa acagttttgt ttttctctct gttctgggta gcttgtttca gacttattcc
     1861 agcgtctcct gcttggggaa gagtgagcca tctgctggtc aggaggccct tcagacatgc
     1921 cgcttgttcc ttacctaggc agttggagcc ttcctagagg agaggctagt gcggctacag
     1981 cctggcccag ccgcctggga gctgtgtctg ttcacctccc ttcaagttgg gattgcaagg
     2041 ggcctgccta gatttcccgg gaaacagacc acacttggtc ttaatcttcc ttccccctgt
     2101 ttactttgct tagttttcag cagcactgta ccccatcttt atatatccta agaaacacta
     2161 accctaggtt tttattaatc aaaatatttg tgttctgaat aaccagaaga tgtgaggagc
     2221 cctgactgta atttcctggg gtctaccagg ttgtgcgcac agatggggct cttggatgtt
     2281 gactgacttg gagtgcctgt cccagaggaa ggcagaagac cactcgctct ggcctttctg
     2341 ggagcccctg atgtttacca ggcttccata cctctcctga gtggctgtgc cccattcgtt
     2401 gctgtgcaag tggaatggga gatttgctgt ttgtagggac tgctctccta ggctgtctcg
     2461 tgcccccctc tggcttcctg tactgcagga gacccagcaa cctcacctgt gacctggagg
     2521 cactcctggg aagggcatgg tgggttcact gagtttggtt tgcccacttc taccccacct
     2581 gtctgagagc tcccatggct gtgtaggatg ctccagtagg ggtgatacta ggatgaggga
     2641 ttttcccccc acagtgcact gagcaggggg aggagggaag gagccatgct gctgacatat
     2701 tctggcaccc cctcctggag tgaaacggcg tctgcagggt agagcagtct ctgcttgtaa
     2761 gataaatctg gagaagcgca gttgtcccat tgaacaatat ttgagcaaaa aaactactgt
     2821 aaataactgg tttttgtctt ttgtcaaata aaattgtttt ggttttgttt atgtttaaag
     2881 tcaaaaaaaa aaaaaaaaaa aaaaaaaa
//
